Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3936g00005 ATGGCAGAAGCTAAGGTTGAGATTGTATCCCAAGTCACCATAAAGCCATTATCTCCAACTCCGAATCACCTTAAACACTTCCAAATTTCTCTCCTTGACGAGATAGCTACTCCTCCTTCTTTTTATGTTCCCGTTGTTCTCTTCTACTTTGCTTCTGATCATGATTTTTTCAAAGTGTCTCAAAAGTTGAAGACTTCGCTATCTCAAATTCTCACTCTCTATTATCCATTCAGTGGAAGAATCAAAAGAAATAAAAGCAATCTCTATGTTGATTGCAATGATGAGGGTGTCCTTTACCTTAAAGCTAGAGTCCCCTCAAAGCTCTCAGATTTTCTCAAGGGTAATACTAACGAACAACTCAATGAGATTAAAGGGTTTCTTCCATTAGATCCCTATAAGCCTAAACTAGACGATGATGATGAAGATCGTCTAATAATGGCTGTTCAGGTTACTGAGTTTTGCTGTGGAGGTATAGCAATTGGTTTGTGCATCTCACACAAGGTTTGTGACGCAACATCAGTAGCTTCTTTCCTCAAAGCTTGGTCCCAAAGGGCAATGGGAGAAGCTTCTTCTTCACCTCTTAATATGGAAGCTTCTTTTCTTTTTCCACCCAAAGGCGTAGGGATTGACATCAATGACAGGGTAGGTGAGAAAAACATTACAACAAAGAGATTTCTGTTTAGTGAAAATAGCTTGTGCAAATTGAAAGAAGAAATTTCAAGAGGTTGTGGCTTTAAACCTACCAGAGTTGAAGCTGTGACAGCTTTGATATGGAAATCGGCGTTGGAAGCTGCAAGAAACACAGAACCAAGTGACAAAAGTACTTCATTCCTGTTACATGCCGTGAACATCCGTGGCCGGATGCAGCCGTCGTTGCTGGAAAATTCTTTAGGTAATCTTTTTGTATATGCAATTTCTCCATTGTTTGAAGTTGACAAAGAAACGAAGATGAAGCTACAAGATTTGGTAGAAGTAGTGAGAAAAACCATAAAAATGGTTGATGGAAATTATGTGCGTAAGCTTCAAGGAGATGGTCAGGAGCTTATGGAGACTCTTGAACCAATGTCACACAAGTTGGTGGCTAAGAAAGATGTTCCTTGTTATAGCTTCAGTAGTTGGGTGAGGTTTGGTTTTTATGAAACAAGTTTCGGATGGGGCAAGCCAACCTGGGTCTGTACTATTGGAGTGCCTATAAAAAATGTGATCATTTTGATGCCAACTTGTTCTGGAGATGGAGGATTAGAGGCTTGGATCACTTTGAATGAGCTTCATATGTGCCAATTTGAAACCCATCCTCTACTTCTTCAATTTGTTTATTCTAATCCATAA 1329 0.395 MAEAKVEIVSQVTIKPLSPTPNHLKHFQISLLDEIATPPSFYVPVVLFYFASDHDFFKVSQKLKTSLSQILTLYYPFSGRIKRNKSNLYVDCNDEGVLYLKARVPSKLSDFLKGNTNEQLNEIKGFLPLDPYKPKLDDDDEDRLIMAVQVTEFCCGGIAIGLCISHKVCDATSVASFLKAWSQRAMGEASSSPLNMEASFLFPPKGVGIDINDRVGEKNITTKRFLFSENSLCKLKEEISRGCGFKPTRVEAVTALIWKSALEAARNTEPSDKSTSFLLHAVNIRGRMQPSLLENSLGNLFVYAISPLFEVDKETKMKLQDLVEVVRKTIKMVDGNYVRKLQGDGQELMETLEPMSHKLVAKKDVPCYSFSSWVRFGFYETSFGWGKPTWVCTIGVPIKNVIILMPTCSGDGGLEAWITLNELHMCQFETHPLLLQFVYSNP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3936g00005 442 Gene3D - 3 207 IPR023213 -
Pral3936g00005 442 PANTHER F21J9.9 7 438 - -
Pral3936g00005 442 Pfam Transferase family 4 432 - -
Pral3936g00005 442 Gene3D - 217 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3936g00005 Pral-Chr3936 121727 123152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3936g00005 5 429 Monolignol Biosynthesis Gene Families AT5G48930 26.742 2.49e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3936g00005 - K13065 gmx:100792323 411.379