Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3936g00003 ATGGCAGAAGCTAAGGTTGAGATTGTATCTAGAGTCAACATAAAGCCATTATGTCCAACTCCAAATCACCTAAAGCACTTCAAATTTTCTCTCCTTGATGAGCTAGCTCCTCCTCCTTCTGTTTATGTTCCCATTGTTCTCTTCTATGCTGCTTCTGATCATGATTTTCCCAAAATATCCCAAAAGTTGAAGACTTCATTATCTAAAGTTTTCACTCTCTACTATCCATTTTGTGGAAGAATCAAAGGAAACAAAGGCAATCTCTATGTTGATTGTAATGATGAGGGTGTCCATTATCTTGAAGCCAGAGTGCTCTCAAAGCTCTCAGATTTTCTCGAGAATAATACAAACCAACAACTCAATGAGATTAAAGGGTTTCTTCCATTAGATCCCTACAAACCTAAGCTAGATGATGATGATGAAGATCGTCTAATAATGGCTGTTCAGGTTACTGAGTTTGGCTGTGGAGGCATAGCAATTGGTGTGTGCATCTCACACAAGGTTTGTGATGGAAAAACAGTAGCTTCATTCCTTCAAGCTTGGTCTCAAAAGGCAAATATGGGAGATGGAGGTGATGTAGTGGCTTCTTCTTCATCTTTCAATATGAAAGCTTCTTTGCTTTTTCCACCCAAAGGCCTAGAGATTGATGTCAATGACAAGATAGGTGAGAAGAATACCACAACGAAGAGATTCTTGTTTAGCGAAAATAGTTTGTGTACACTAAAAGAAGAAGTTTCAAGAGGTTGTGGCTTTAAGCCTACCAGAGTTGAAGCCGTGACAGCTTTAATATGGAAATCAGCCTTGGAAGCTGCAATAACCACAGAGACAAGTCAGAAAAGTAATAGTTCATTCATGTTACATGCTGTGAACATTCGAAGTCGAATGTTACCACCGTTGCCAGAGGATTCTATGGGTAATCTCTTTGTATCTGCCACTTCTCCGTTGGTAGAAGTTGACAAAGAAATGAAGGTAGAACTACAAGACTTGGTTGAAGTAGTGAGAAAAACCATAAAAATGGTTGATGGGGATTATGTCCGCAAGCTTCAAGGAGGAGAAGGTCAAGAACTTGAAATCCTTGAATCAATGTTACAAAAGTTGTATTTGGTGTATGAGAAAGGTGTTCCTTATTACATCTTCACTAGCTGGTTGAGGCTTGGTTTCTATAAAACAAACTTTGGATGGGGCAACCCAACGTGGGTTTGTACTATTGGAGTGCCAGTAAGAAATGTGGTTATTTTGATGCCAGCTCGTTCTGGGGATGGAGGAATAGAGGCTTGGGTCACCTTGAATGAGTTTCACATGTCCCAATTTGAAACCAGTCCTCTACTTCTTCAATTTGCTTCTTTTGACCCTTAA 1356 0.3968 MAEAKVEIVSRVNIKPLCPTPNHLKHFKFSLLDELAPPPSVYVPIVLFYAASDHDFPKISQKLKTSLSKVFTLYYPFCGRIKGNKGNLYVDCNDEGVHYLEARVLSKLSDFLENNTNQQLNEIKGFLPLDPYKPKLDDDDEDRLIMAVQVTEFGCGGIAIGVCISHKVCDGKTVASFLQAWSQKANMGDGGDVVASSSSFNMKASLLFPPKGLEIDVNDKIGEKNTTTKRFLFSENSLCTLKEEVSRGCGFKPTRVEAVTALIWKSALEAAITTETSQKSNSSFMLHAVNIRSRMLPPLPEDSMGNLFVSATSPLVEVDKEMKVELQDLVEVVRKTIKMVDGDYVRKLQGGEGQELEILESMLQKLYLVYEKGVPYYIFTSWLRLGFYKTNFGWGNPTWVCTIGVPVRNVVILMPARSGDGGIEAWVTLNEFHMSQFETSPLLLQFASFDP 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3936g00003 451 Gene3D - 3 214 IPR023213 -
Pral3936g00003 451 Pfam Transferase family 4 440 - -
Pral3936g00003 451 PANTHER F21J9.9 7 448 - -
Pral3936g00003 451 Gene3D - 223 443 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3936g00003 Pral-Chr3936 85634 86989 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3936g00003 5 438 Monolignol Biosynthesis Gene Families AT5G48930 24.945 1.98e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3936g00003 - K13065 gmx:100792323 404.06