Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3935g00029 ATGAGTACTCGTTCTGTTAGGGAGCGTTCTCTCAGAAGTTACCGACGAAGGAAGGCTGGTTTGGATTTGGATCTTAATAGAGCTCCGCCTGGTGAGAACCGGGAGCAAGAGGGACCTTCGATTCCACCAGAACCTCAGTTAGTTCAAGCCGTCCAGCAGCCACAAGTTGTACAGCCTATTGATGTGGAGGCCATCGATGATGATGTAATTGAATGTACAGCAAGTGCTTTTGCTGAAGCTAAAAACAATTCAAGAAGGAACCGTGGGAGGACTGTAGTTGATGTGGATTTAGATTACCGGAGTTGGATAAATGAAAATGCTACCAACAATTGCAGAAGAGATTCTTCAAACCAAACAATTCCTAATTCTGATGTATGTATAAACTTGGAAGGCAGTGGCAGCTCTGAGTGGGAGAAACCTAAACCTCCAATGGAGCCTGTCTTTAGCTGTCCAATATGTATGGGCCCATTTGTAGAGGAAGTGTCAACAAGGTGTGGTCATATATTCTGTAAGAGTTGCATCAAGGCTGCTATAAATGCTCAGGGTAAATGCCCTACGTGTAGGAAAAAGGTTACTGCAAAAGAGCTCATCAGGGTGTTTCTACCATCAACTAGTTGA 618 0.4417 MSTRSVRERSLRSYRRRKAGLDLDLNRAPPGENREQEGPSIPPEPQLVQAVQQPQVVQPIDVEAIDDDVIECTASAFAEAKNNSRRNRGRTVVDVDLDYRSWINENATNNCRRDSSNQTIPNSDVCINLEGSGSSEWEKPKPPMEPVFSCPICMGPFVEEVSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTAKELIRVFLPSTS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3935g00029 205 ProSiteProfiles Zinc finger RING-type profile. 150 188 IPR001841 -
Pral3935g00029 205 Pfam Zinc finger, C3HC4 type (RING finger) 150 187 - -
Pral3935g00029 205 MobiDBLite consensus disorder prediction 15 31 - -
Pral3935g00029 205 SMART ring_2 150 187 IPR001841 -
Pral3935g00029 205 MobiDBLite consensus disorder prediction 1 44 - -
Pral3935g00029 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 203 IPR013083 -
Pral3935g00029 205 PANTHER ELFLESS, ISOFORM B 1 205 - -
Pral3935g00029 205 ProSitePatterns Zinc finger RING-type signature. 165 174 IPR017907 -
Pral3935g00029 205 SUPERFAMILY RING/U-box 143 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3935g00029 Pral-Chr3935 347864 351438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3935g00029 12 204 C3H Transcription Factor Family AT5G48655 49.246 1.15e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3935g00029 K22651 - qsa:O6P43_026661 243.817