Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3935g00020 ATGAAGAAGCTGTGGGGGAGCGAGTGGGCGGAGTATAAGCCGAAGAGATGGTTAGAGAGAGAGAGAAGTGGTGAAGATTCAGACAAGTGGAGGAACGTGGCGAGAGATCTGTTTAGCTATCCAGTGTTTCAGGCGGGACCAAGGATTTGCCTAGGGAAGGAGATGGCGTACTTGCAAATGAAGAGGGTGGTAGGTGTGATTCTGACGAGGTTCACGGTGGTTCCAGCGATGCTGGAAGGGATGGAACCACAATTCTTTGGCCTAAAACTGTCTTTCAAGTTTGCAATAAAAAATTGGAATAGTCTCACTGGTAGAATACCATATCAGCTAGGGGGTCTTCAGAAGCTTGAACAGTTGCAACTTTCTACCAACAATTTAACTGGAGAAATCCTAATGTCTATATGGAATCCTACTTACCTCACCTACCTTGCAATAGCCTATAATAACTTGGAAGGAAGCATACCGGAGGAGATAGGCCATTTGAAGAACTTGACACTTTTTGCAACAGCAATGAATACTTTATCAAGTGCTCTTCCTTCCTCACTTTACAACCTTTCATCTCTCACTGTGATATCATTGGCAGTGAAGCATTTGAACATTAATCGGCTTCCGTATAACATGTTCTCCACCCTTCCAAATCTGGAGCATTTAACCATAGGATCAACACTAATCGACTTACAGAACATTTCTTCTCTTCAATACTTGAACGTTTCGTTCAATATGTTTGATAGTGAGGTGCCAATAGAAGGGGTTTTCAGCAATAGGTGTGAAAGAAACAAGAATTCATCTTCAACTTCACCTAGAATTGAACAGTTTTCAAAGGTTTCATATCAAAATCTACACATTACAACTGAAGGTTTCTCTACCAACAACTTGATTGGATCCGGGAGTTATGGCTCAATATATAAAGGAAGGTTAGAATCAGAAGATAAAATTGCAGCAATAAAGGTATTGGACCTTCAAAAGAAGGGAGCCCAAAAGATTTTCATTTCAGAATGTAATGCATTAAAAAACATAAGGCATCAAAATTTGGTAAAAATTTTGACATGTTGCTCAGGCATTGATTACAAGGGACAAGAATTTAAGGCCTTGGTATTTGAATATATGTCAAATGGAAGTCTTGAGAAATGGTTGCATCCTAATGAAGAAAGTGCATATTTGTCAACATTGGATATTTGTCAAAGGTTCAATGTTATATATGATGTTGCCTCTGCACTATGTTATCTTCATTATGAAGATGAGCAACCAGTTGTCCATTGTGACTTAAAGCCCAGCAATGTCCTTCTTGATGATGATGTGGTGGCTCACGTCAGTGACTTTGGGTTAGCAAGACCACTTGCCACACTTAATGGCCATTCTCAAAAGCAAACAAGCACATTTGGAATAAAAGGGACAATTGGCTATGCTCCTCCGGAGTATGGAATAAGTTCTGGGGTGTCAAAAGAAGGTGATGTGTATTCTTTTGGTATTCTTATTTTGGAAATGTTAACTAGAAAAATACTGACAGATCAAATATTTGAAGATGGTCACAATCTTCATAGCTATGTCAAAGCTGTATTTCCAAACAATCTTTTAGAGATTGTGGACAAAGCTGTTCTACCCCACCAAATACCACAAACAATATCAATAGCCATGGAAGAAATCAGGACAGAAGAGCCGGCTCATATGCATCCCAACCATGAGAGGACTCTAATTTCACTGTTTGACATTGGACTTGCTTGTTCAGTGCAATCTCTGAAAGAAGGGATGAACATGATGGGTGTGCTAAAGGAGCTAAATCAAATTAAAAATGCTCTTGGTCTTCGGGGGAGAAGTCAAAATTGA 1824 0.3953 MKKLWGSEWAEYKPKRWLERERSGEDSDKWRNVARDLFSYPVFQAGPRICLGKEMAYLQMKRVVGVILTRFTVVPAMLEGMEPQFFGLKLSFKFAIKNWNSLTGRIPYQLGGLQKLEQLQLSTNNLTGEILMSIWNPTYLTYLAIAYNNLEGSIPEEIGHLKNLTLFATAMNTLSSALPSSLYNLSSLTVISLAVKHLNINRLPYNMFSTLPNLEHLTIGSTLIDLQNISSLQYLNVSFNMFDSEVPIEGVFSNRCERNKNSSSTSPRIEQFSKVSYQNLHITTEGFSTNNLIGSGSYGSIYKGRLESEDKIAAIKVLDLQKKGAQKIFISECNALKNIRHQNLVKILTCCSGIDYKGQEFKALVFEYMSNGSLEKWLHPNEESAYLSTLDICQRFNVIYDVASALCYLHYEDEQPVVHCDLKPSNVLLDDDVVAHVSDFGLARPLATLNGHSQKQTSTFGIKGTIGYAPPEYGISSGVSKEGDVYSFGILILEMLTRKILTDQIFEDGHNLHSYVKAVFPNNLLEIVDKAVLPHQIPQTISIAMEEIRTEEPAHMHPNHERTLISLFDIGLACSVQSLKEGMNMMGVLKELNQIKNALGLRGRSQN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3935g00020 607 Gene3D Cytochrome P450 1 79 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3935g00020 607 SMART serkin_6 287 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00020 607 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 369 604 - -
Pral3935g00020 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Pral3935g00020 607 SUPERFAMILY L domain-like 98 248 - -
Pral3935g00020 607 Pfam Protein kinase domain 288 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00020 607 Pfam Cytochrome P450 10 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3935g00020 607 Gene3D Ribonuclease Inhibitor 80 268 IPR032675 -
Pral3935g00020 607 SUPERFAMILY Cytochrome P450 3 78 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3935g00020 607 Gene3D Transferase(Phosphotransferase) domain 1 369 602 - -
Pral3935g00020 607 Gene3D Phosphorylase Kinase; domain 1 269 368 - -
Pral3935g00020 607 ProSiteProfiles Protein kinase domain profile. 287 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00020 607 FunFam LRR receptor-like serine/threonine-protein kinase EFR 258 368 - -
Pral3935g00020 607 SUPERFAMILY Protein kinase-like (PK-like) 260 543 IPR011009 -
Pral3935g00020 607 PANTHER OS04G0122200 PROTEIN 99 596 - -
Pral3935g00020 607 ProSitePatterns Protein kinases ATP-binding region signature. 293 316 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3935g00020 Pral-Chr3935 250302 255574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3935g00020 78 533 Receptor kinase-like Gene Family AT3G47090 41.075 1.61e-98 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3935g00020 Pkinase 6.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3935g00020 - - ahf:112742943 458.759