Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3935g00018 ATGGCTTTTGCCCCCGGTTCATTTTCATTTCTTTCCAAATACTACCTTCAACCATTAATCCTTGTCATCTTCTACATAAACTTGCTTTGCTTCCAGCATGTTAGAGCTGCATCAAATGAGACTGATTATTTGGCATTGCTCAAGTTTAAAGAATCAATAACTGATGATCCTCATGAAATCTTGAGCTCTTGGAATAGTTCGAAACACTTCTGCAGTTGGACTGGAATCACATGCGGCCACAAGCATCAGCGAGTCACCAAGTTGAATTTGGGAGGCTATCAGCTTGGTGGGATCATATCGCCCCACATTGGCAATCTCTCTTTCGTGAGATATCTCTCCCTTTCAAACAATAGTTTCCATGGAGAAATTCCACCAGAGTTGGGACATTTGTTCAGGCTAAAGAAAATCTTGCTCCCAAGCAACACATTGACAGGAGAGATTCCCTGGAACTTGACAAGTTGTACTGAATTGAGGATCTTTAGTTTGAGAAGGAATAGTCTTAGTGGTACAATACCATATCAGTTAGGGGCTCTTCAGAAGCTTGAACAGTTGCAACTTTTTGGCAACAATTTAACTGGAAAGATCCCATTATCTATATGGAATCTTACTTCGCTCACTTATCTTGGAATGGGGGATAATAAGTTGGAAGGAAGAAATCTTAAAAACCTTGGCAAGTTGGATATCTCTAGAAATAATCTTTCCAGAGAGATTCCTTTAACCATAGGAGAGTGCACAAGTATGGAATACCTTAACTTGCAAGGAAATTCCTTCAATGGGCCCATGCCTCCTTCTCTAGCTTTGATGAAAGGTCTTGAGCATTTGGATTTATCACAAAATAACCTATCTGGGCCTATGCTAGCTGGCCTACAAAACATTTCTTCTCTTCAATACTTAAATGTTTCCTTCAATAAGTTTGATGGTGAGGTGCCAACAGAAGGGGTTTTCAGCAATGCAAGTGCAATATCAATTTCTGGAAATATCAATCTTTGTGGGGGAATTTCTAAGTTGCACTTACCCCCATGCCCTAAGAGAGTTGACACACAAACAAAACATAATCTGAAGCTCATGATTATTTTGATTTGTGTGGCCTCTTCTCTTTTTCTTATAATTTTGTTTGGTCTCTATTGGAGGCGAGAAAGAAACAGGAAATCATCTTCAAGCTCACCTGTAATTGAACAATTTCCCAAGGTGTCATATCAAAATCTACACATGGCAACTAAAGGTTTCTCCACCAACAATTTGATTGAATTTGGAAGTTTTGGCTCAGTATATAAAGGAAGGCTAGAATTGAAAGATAAAGTTGTTGCAATAAAGGTACTGAACCTTCAAAAGAACGGAGCTCAAAAGAGTTTCATTTCAGAATGTAATGCATTGAGAAACATAAGGCATCGAAATTTGCTAAAAATTTTAACATGTTGCTCAAGCATTGATTATAAGGGACAAGAATTTAAGGCACTAGTGTTTGAGTACATGTCAAACAGAAGCCTTGAGAAATGGTTACATCACAATCAAGGAAGCGTACCTCAGTCAACATTAGATATTTGTCAAAGATTTAATGTTATATATGATGTTGCATCGGCACTACATTATCTTCATTATGAAAATGAGCAACCAATTGTCCATTGTGACTTAAAGCCTAGCAATGTCCTTCTTGATGATGATATGGTAGCTCATGTAAGTGATTTTGGGTTAGCAAAACTACTTGCAACCCTTAATGGTAGTTCTCAAAAACAAGCAAGCACATCTATAATAAAAGGAACGATTGGCTATGCTCCTCCAGAGTATGGAATAACTTCTGAGGTATCAATACAAGGTGACATCTATTCTTTTGGTATTCTTATTTTGGAAATGTTAACCGGAAAAAGACCAACAGATCTAATATTTGAAGATGGCCACAATCTTCATAGTTACGTCAAAGCTGCATTTCCAAACAATCTTTTGAAGATCGTGGACACAACTCTTGTATGCCAGCAAGTACAACAAACAACAATAGTAGCTAAAGGAGAAATTAGGATGGAGGAGGTGGCTCTTGTGCATCCCCACCATGAGAAGATTCTAATTTTACTGTTTGAAATTGGACTTGCTTGTTCAGTAGAATCTTCTAAAAAAAGGATGAACATGATGGGTGTACTAAGGGAGCTAAATCAAATTAAAAATGCTCTTGCTCTTGGGGAAAGAAGTCAAAATTGA 2190 0.3772 MAFAPGSFSFLSKYYLQPLILVIFYINLLCFQHVRAASNETDYLALLKFKESITDDPHEILSSWNSSKHFCSWTGITCGHKHQRVTKLNLGGYQLGGIISPHIGNLSFVRYLSLSNNSFHGEIPPELGHLFRLKKILLPSNTLTGEIPWNLTSCTELRIFSLRRNSLSGTIPYQLGALQKLEQLQLFGNNLTGKIPLSIWNLTSLTYLGMGDNKLEGRNLKNLGKLDISRNNLSREIPLTIGECTSMEYLNLQGNSFNGPMPPSLALMKGLEHLDLSQNNLSGPMLAGLQNISSLQYLNVSFNKFDGEVPTEGVFSNASAISISGNINLCGGISKLHLPPCPKRVDTQTKHNLKLMIILICVASSLFLIILFGLYWRRERNRKSSSSSPVIEQFPKVSYQNLHMATKGFSTNNLIEFGSFGSVYKGRLELKDKVVAIKVLNLQKNGAQKSFISECNALRNIRHRNLLKILTCCSSIDYKGQEFKALVFEYMSNRSLEKWLHHNQGSVPQSTLDICQRFNVIYDVASALHYLHYENEQPIVHCDLKPSNVLLDDDMVAHVSDFGLAKLLATLNGSSQKQASTSIIKGTIGYAPPEYGITSEVSIQGDIYSFGILILEMLTGKRPTDLIFEDGHNLHSYVKAAFPNNLLKIVDTTLVCQQVQQTTIVAKGEIRMEEVALVHPHHEKILILLFEIGLACSVESSKKRMNMMGVLRELNQIKNALALGERSQN 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3935g00018 729 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 84 716 - -
Pral3935g00018 729 SMART serkin_6 409 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00018 729 FunFam LRR receptor-like serine/threonine-protein kinase EFR 380 490 - -
Pral3935g00018 729 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Pral3935g00018 729 SMART LRR_typ_2 292 317 IPR003591 -
Pral3935g00018 729 SMART LRR_typ_2 220 244 IPR003591 -
Pral3935g00018 729 SMART LRR_typ_2 178 202 IPR003591 -
Pral3935g00018 729 SMART LRR_typ_2 268 291 IPR003591 -
Pral3935g00018 729 SMART LRR_typ_2 106 130 IPR003591 -
Pral3935g00018 729 ProSiteProfiles Protein kinase domain profile. 409 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00018 729 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Pral3935g00018 729 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 218 338 - -
Pral3935g00018 729 Gene3D Phosphorylase Kinase; domain 1 373 490 - -
Pral3935g00018 729 Gene3D Ribonuclease Inhibitor 42 153 IPR032675 -
Pral3935g00018 729 Gene3D Ribonuclease Inhibitor 154 218 IPR032675 -
Pral3935g00018 729 Gene3D Transferase(Phosphotransferase) domain 1 491 727 - -
Pral3935g00018 729 Gene3D Ribonuclease Inhibitor 219 338 IPR032675 -
Pral3935g00018 729 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 39 196 - -
Pral3935g00018 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Pral3935g00018 729 Pfam Protein kinase domain 414 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00018 729 SUPERFAMILY Protein kinase-like (PK-like) 382 714 IPR011009 -
Pral3935g00018 729 SUPERFAMILY L domain-like 38 331 - -
Pral3935g00018 729 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 491 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3935g00018 Pral-Chr3935 208894 212114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3935g00018 76 727 Receptor kinase-like Gene Family AT3G47570 41.518 1.39e-161 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3935g00018 Pkinase 6.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3935g00018 - - qsu:111984688 719.924