Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3935g00011 ATGGTTTTTGCTCTCTTGTCAACTCATTTTCGTTCCATATACTACCAAGCAATCATTTTTTTGTGCGTAAACTTACTTTGGCTTCAACATACCAGGGCTGCATCTGCATTAGGAAATGAGACTGACTATATGGCATTGCTCAAGTTTAAAGAATCAGTAACCAGTGATCCATATGAAGTCTTGAGCTCCTGGAATAGTTCAAGTCACTTCTGCAACTGGCATGGAATCACATGCAGCCGCAGACACCAAAGAGTCGTTGAGTTGAGGCTGCCAGGATATCATTTGCGTGGGGTTCTCTCACCCTATGTTGGCAACCTCTCCTTCCTGAGAAACCTCTACCTTCCAAATAACAGCCTTCATGGAGAAATTCCACCACAATTGGGTAGTTTGTTCAGGCTGCAGCAGCTATCTCTCAGAGATAATACATTAACAGGAGAGATTCCCATCAACCTGACAAGCTGCACTGAGCTCAGGCACTTAAATTTGTCAAGCAATAGTCTTACAGGTAAAATGCCACTCGAGCTTGGCTCTCTCAGGAAGCTTGAAAAGCTGAACTTATTTACAAATAAATTAACTGGAGAAATCCCAGCTTCCATTTGGAATCTTTCCTCCCTTGATGTTCTTTCAGTGGGTTATAACAACTTGGAAGGGAGCATACCAGAAGAAATAGGCCACTTGAGCAGATTGAGTGTTTTAGCAATAGTAGATAACAATTTTTTTGGTGTGCTTCCTTCTTCATTTTACAATATGTCATCCCTCACATTCATATCTGCAGCAAAAAACCAGCTGAGTCGAACTCGACTTCCAGACAAGATGTTCACCACCCTCCCTAATTTGCAATATTTTGCCATAGGTGATAACCAAATATCAAGTTCAATCCCAACTTCAATAACAAATGCATCCTTTATTCAACTATTTGACATTGGTTTAAACAATTTTGTTGGAAAAGTTCCAAGTCTAGGAAACCTAAAAGATTTGCAAGTGCTAAATCTGAACTATAATAATCTTGGAGATAGTTCAGACCATGACTTGGATTTTATAACATCTTTGGAAAATTGTACGAAACTAGAAAATTTGATTCTATCCACCAACAAATTCGGAGGTCTTTTACCTGACTCCATAGGCAATCTGTCAACCCAACTCATTCGACTGTACCTTGGTGATAATCAGATATATGGAACTATTCCCGAAACTTTAGGAAGGTACACAAATTTAATTGCCTTGGTCCTGGAATACAACCAGTTTACAGGCTCAATTCCAGCATCTTTTGGAAAATTGAATAATTTGCAAATATTAGGCTTGGGGAGAAACCAACTTTCTGGAGAGATACCAGCCTCCTTAGGCAATCTCAGTTACTTGGTTCAATTAAGCTTTTCAGAGAATATGCTTGAAGGAAAAATTCCATCCGAGATAGGAAATTGGCAAAATATAGTGCTTCTAGACCTTTCAGAAAACAATCTTAGTGGTGCTATACCCTTGCAGGTTTTTACTCTTTCCTCCTTGTCCACATTGCTGAACTTCTCCCACAACTCATTAAACGGCTCTCTACCTATTGACGTGGGAAGACTTAAAAGTCTTGGCACTTTTGATATCTCTGAAAATTATCTTTCTGGGGAGATTCCTAGGACCATAGGAGACTGCATAAGTTTGGAATACCTTACCTTACAAGGGAATTTGTTCAGTGGGTCCATGCCCCCTTCACTAGCTTCACTGAAAGGCCTTAAGTATCTAGATCTATCACAAAACAACTTTTCTGGATCAATACCAACAGGTCTGCAGAATATATCCGCCCTTGAATACTTGAATGTTTCATTTAATGCATTGGATGGTAAAGTGCCAACAGATGGGATTTTCAAGAATGCAAGTGCCATATCAATTGCGGGTAATTATAAGCTTTGTGGGGGTATTGCTGAGCTGCATTTACCACCATGCCCTGACAAAACTAGGACAAACAATAAAAATCATCGTTTGAAGGTCGTGGTTATTATCATTTGTGTTATTGTTTGTGCTGTCCTATCATCTATATTTGCTATCTACTGCTGGAGGAAACGAAACAGGACACTGCCTTCAACTTCACAACCAACTGGCCAGCCCTCCAATATATCATACCAAAGCTTACACTCTGCAACAGAAGGGTTCTCCAGCAATAACTTGATCGGGTATGGAAGTTTTGGTTATGTGTATAAAGGAAAGCTGCAATCAGAAAGCAGAGTTGTTGCTATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCAAACAAGAGTTTCATTTCTGAATGTAATGCACTTAAAAACATCAGGCACAGAAATTTGGTTAAGATTTTAACATGTTGCTCCAGCTTGGATTATAAAGGGCAAGAATTTAAAGCACTAGTCTTTGAGTACATGTCAAATGGAAGCTTAGAGCAATGGTTGCATCCTAGTCCAGAAAGTATAGATCAGCCTAGAACTTTGAATTTAGCTCAAAGATTAAATATTTTAAATGACGTTGCTTGTGCACTGCATTATCTTCACTATGAATGTCAGCAAACCATTGTCCATTGTGATTTGAAGCCAAGCAATATTCTTCTTGATGATGATATGACTGCTCACGTTAGTGACTTTGGGCTAGCAAGACTTCTTGCAATCCTCAATGGCAGCTCTAAGAAGCAAACCAGCACAGTTGGAATAAAAGGGACTATTGGGTATGCTCCTCCTGAGTATGGAATGACTTCTGAGGTATCAAGGGAAGGTGATGTTTATTCTTTTGGGATTCTAGTTTTGGAAATGCTTACTGGCAAAAGGCCCACTGAAGACATGTTCAAAGATGGTCACAATCTCCATAACTATGCAAGATCTGCATACCCAGATGACCTCTTGGACATTGTGGACTCAGATCTTTTACAGAAAGATTTAAAGCAGACTGCATCTTCAAGATCAGAGCAAATCAACATGCAGAACCAGAGCCTGTCGCATTATAATGAAGAGAAGTGTATAATTTCACTATTCAGCATTGGACTTGCTTGCTCAGAAGAATCACCCAAAGAAAGAGCGAATATGATGAGTATCACAAGGAGGCTAGATCTCATTAGAAATGCTCTCTGCTGTCATGAAATGAAAGGGAATTGA 3105 0.3952 MVFALLSTHFRSIYYQAIIFLCVNLLWLQHTRAASALGNETDYMALLKFKESVTSDPYEVLSSWNSSSHFCNWHGITCSRRHQRVVELRLPGYHLRGVLSPYVGNLSFLRNLYLPNNSLHGEIPPQLGSLFRLQQLSLRDNTLTGEIPINLTSCTELRHLNLSSNSLTGKMPLELGSLRKLEKLNLFTNKLTGEIPASIWNLSSLDVLSVGYNNLEGSIPEEIGHLSRLSVLAIVDNNFFGVLPSSFYNMSSLTFISAAKNQLSRTRLPDKMFTTLPNLQYFAIGDNQISSSIPTSITNASFIQLFDIGLNNFVGKVPSLGNLKDLQVLNLNYNNLGDSSDHDLDFITSLENCTKLENLILSTNKFGGLLPDSIGNLSTQLIRLYLGDNQIYGTIPETLGRYTNLIALVLEYNQFTGSIPASFGKLNNLQILGLGRNQLSGEIPASLGNLSYLVQLSFSENMLEGKIPSEIGNWQNIVLLDLSENNLSGAIPLQVFTLSSLSTLLNFSHNSLNGSLPIDVGRLKSLGTFDISENYLSGEIPRTIGDCISLEYLTLQGNLFSGSMPPSLASLKGLKYLDLSQNNFSGSIPTGLQNISALEYLNVSFNALDGKVPTDGIFKNASAISIAGNYKLCGGIAELHLPPCPDKTRTNNKNHRLKVVVIIICVIVCAVLSSIFAIYCWRKRNRTLPSTSQPTGQPSNISYQSLHSATEGFSSNNLIGYGSFGYVYKGKLQSESRVVAIKVLNLQKKGANKSFISECNALKNIRHRNLVKILTCCSSLDYKGQEFKALVFEYMSNGSLEQWLHPSPESIDQPRTLNLAQRLNILNDVACALHYLHYECQQTIVHCDLKPSNILLDDDMTAHVSDFGLARLLAILNGSSKKQTSTVGIKGTIGYAPPEYGMTSEVSREGDVYSFGILVLEMLTGKRPTEDMFKDGHNLHNYARSAYPDDLLDIVDSDLLQKDLKQTASSRSEQINMQNQSLSHYNEEKCIISLFSIGLACSEESPKERANMMSITRRLDLIRNALCCHEMKGN 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3935g00011 1034 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Pral3935g00011 1034 Pfam Leucine rich repeat 380 439 IPR001611 GO:0005515
Pral3935g00011 1034 SMART LRR_typ_2 276 300 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 426 450 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 178 201 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 106 130 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 323 346 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 498 523 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 595 620 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 571 594 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 250 275 IPR003591 -
Pral3935g00011 1034 SMART LRR_typ_2 202 226 IPR003591 -
Pral3935g00011 1034 Pfam Protein kinase domain 715 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00011 1034 ProSiteProfiles Protein kinase domain profile. 713 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00011 1034 FunFam LRR receptor-like serine/threonine-protein kinase EFR 684 794 - -
Pral3935g00011 1034 SUPERFAMILY L domain-like 39 336 - -
Pral3935g00011 1034 Pfam Leucine Rich Repeat 157 176 IPR001611 GO:0005515
Pral3935g00011 1034 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1032 - -
Pral3935g00011 1034 Gene3D Ribonuclease Inhibitor 198 336 IPR032675 -
Pral3935g00011 1034 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 268 1014 - -
Pral3935g00011 1034 Gene3D Ribonuclease Inhibitor 39 197 IPR032675 -
Pral3935g00011 1034 SMART serkin_6 713 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3935g00011 1034 Gene3D Phosphorylase Kinase; domain 1 675 794 - -
Pral3935g00011 1034 SUPERFAMILY Protein kinase-like (PK-like) 687 1019 IPR011009 -
Pral3935g00011 1034 Gene3D Transferase(Phosphotransferase) domain 1 795 1031 - -
Pral3935g00011 1034 Gene3D Ribonuclease Inhibitor 338 653 IPR032675 -
Pral3935g00011 1034 SUPERFAMILY L domain-like 379 634 - -
Pral3935g00011 1034 FunFam LRR receptor-like serine/threonine-protein kinase EFR 345 650 - -
Pral3935g00011 1034 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 79 344 - -
Pral3935g00011 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 844 856 IPR008271 GO:0004672|GO:0006468
Pral3935g00011 1034 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Pral3935g00011 1034 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3935g00011 Pral-Chr3935 94923 98284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3935g00011 39 1023 Receptor kinase-like Gene Family AT3G47570 47.047 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral3935g00011 Pkinase 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3935g00011 - - qsa:O6P43_025027 1203.35