Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3930g00007 ATGGGCTTTCTCCGGCGACTCTTCGGCGCCAAAAAATCGGTTCATTCCTCCGCTTCCTCCGGCAAGGACAAGAAGAAATGGAGCTTCAGCAAAACCAAAAAGGACAAGTCTCACGGTTCGAAAACTAAAGGATCTGATCTCAGTCACTTTGATTCCTCTGCAACGTTCTCCGACTCTTTAGATGCCAATAAGCATGCCATTGCTGTAGCGGCGGCCACGGCCGCCGTAGCAGAGGCTGCACTAGCCGCTGCCCATGCAGCCGCCGAGGTAGTCCGACTAACCAATGGCCCCACCGTCACTCGACCGGTGAGCACGACACAGGCCAGCACTAGCCAACGCCGGTGGGTGGAGCAAGCGGCTGCCGTTAAAATACAGTCCGCTTTCCGGTCTTATCTGGCAAGGAGAGCACTACGAGCACTCAAAGCATTGGTGAAGCTGCAAGCACTGGTGAGAGGCCACATAGTGAGAAAGCAAACTGCAGACATGCTCAGGCGCATGCAAACATTGGTCAGACTGCAGGCTCGGGCACGTGCAAGTCGTGGGCACGTGTCAGATCATCTGCCTTCTAGCAAGTCTTCACTGCTTTACCACCCTGTCCCTGAAGATCATGAGCATCCACTTCGTGCCTATAGTACTAAGGTTGATGGATCATCGATCCTAAAGAGATGTAGCTCCAATGCAAATTTTAGGGAGATTGGCCCACAAAGAGCACAGTTTGGATCACATTGGTTGGATCGTTGGATGGAAGAAAGTATTTGGAGCCACTCCAGAGACGCTTCACTGAGAAATGTGCGTGCTGATGATGAGAAGAGTGACAAGATCCTTGAAGTGGACACATGGAAGCCACACCTCAGGTCTCACCGAAGTAGCAGCTCCTTCCACGCATCTCAATACTACATGGCTTCGGACTACCTCAACAGTGAGATGGCATATGACTCTCCATCAAAAAGCTCGGCAAAAGCTCTAAACCAAAGCCTCTCATCACTGAGCTCCTTGAAAATTCAGAAAGGGAAAGAAGTAGCATCAGCTTCAAGAACTGCTGAGAATAGCCCACAAGCACTTTCGGCTTCATCTAGACCTGGAAGTGGAGGAAGGAAAGGCCCTTTCACACCCACAAGGAGTGAGTGTTCTTGGGGTTTCTTTGGCTATCCAAATTACATGGCCAACACTGAATCATCAAGGGCTAAGGTTAGATCTCAGAGTGCTCCTAGGCAAAGGTTGGAATTTGAGAGATACAGTTCAAGTGGGAGAAGTGTTCAAGGGTTCTGGGATTCAGATAGGGATGGAGATTTCAGGAACAGAGTCTATCCATCTTCAACCCACTTGAACAGAGTTGGGAGTGCCAATTTAAGGTGA 1356 0.5007 MGFLRRLFGAKKSVHSSASSGKDKKKWSFSKTKKDKSHGSKTKGSDLSHFDSSATFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGPTVTRPVSTTQASTSQRRWVEQAAAVKIQSAFRSYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQARARASRGHVSDHLPSSKSSLLYHPVPEDHEHPLRAYSTKVDGSSILKRCSSNANFREIGPQRAQFGSHWLDRWMEESIWSHSRDASLRNVRADDEKSDKILEVDTWKPHLRSHRSSSSFHASQYYMASDYLNSEMAYDSPSKSSAKALNQSLSSLSSLKIQKGKEVASASRTAENSPQALSASSRPGSGGRKGPFTPTRSECSWGFFGYPNYMANTESSRAKVRSQSAPRQRLEFERYSSSGRSVQGFWDSDRDGDFRNRVYPSSTHLNRVGSANLR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3930g00007 451 Pfam Protein of unknown function (DUF4005) 345 407 IPR025064 -
Pral3930g00007 451 PANTHER IQ-DOMAIN 5-RELATED 19 417 - -
Pral3930g00007 451 SMART iq_5 116 138 IPR000048 GO:0005515
Pral3930g00007 451 SMART iq_5 139 160 IPR000048 GO:0005515
Pral3930g00007 451 MobiDBLite consensus disorder prediction 1 47 - -
Pral3930g00007 451 Gene3D - 116 169 - -
Pral3930g00007 451 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Pral3930g00007 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 162 IPR027417 -
Pral3930g00007 451 MobiDBLite consensus disorder prediction 17 45 - -
Pral3930g00007 451 MobiDBLite consensus disorder prediction 340 370 - -
Pral3930g00007 451 MobiDBLite consensus disorder prediction 340 359 - -
Pral3930g00007 451 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Pral3930g00007 451 Pfam IQ calmodulin-binding motif 119 138 IPR000048 GO:0005515
Pral3930g00007 451 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3930g00007 Pral-Chr3930 147891 152468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3930g00007 1 421 IQD Protein Family AT5G62070 47.140 1.07e-65 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3930g00007 - - vum:124834771 445.662