Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3930g00006 ATGGATGGGGATGATAACGACTTGGGGAGTGCACATGAAGAAAATGTTGAAGTCAGATCTGAGATATCAAATAACTTGGACTTGAATGTGGAGCAAAACTGTTGCAGCCCCAAGGTTATACATGATAATGGTGCTCAATCTGGTCATGCTTCTGTGGACGAACCCAGTACCAGTAATGTATTGGGAACTGGGACAGAATTTGAATCTGATGAGCATGCATACGGATTCTATAACAAATATGCCAGGTTGCTGGGTTTCAGTGTTAGAAAAGATTGGGTAAATAGGAGTAAAGTACATGGTCAGGTGGTGTCTAGAAAGTTTACTTGCTCCAAAGAGGGATACCGCAGGAAAGACAAAAGAGATGTTAATGTGAAAAAACACAGGAAAGAAACAAGAACTGGTTGCTTGGCTCATATGATCATCACTCGCCAACCAGATGGTAAGTACCGAGTTACCAATTTTGAGGCACAGCACAATCATGATAATATAAATCCTAGTAAAGCTCACATGTTAATGCTGCAAAATGAACTAAGTGTTGCCCAAGGGGTAGAAGCTGACCCTAAAAATACGATAGGACCACCCAAGTCAAAGTCAGCATTGGAAATTATGGATAGAAAATTTGCAGTTCGCGTGTCCCTTGATCAAGTTTGTATGGATTTTGACAATCACCTTCAGTCAGAGAGGGATAGAGATATGAATGAAGGAGAAGCAGGACGTTTATTGGGTTACTTTCAGAGACAACACTTTGAAAATCCTACATTTTTTTATTTCTTACAGTTAGATGTTGATGACAAGGTAAGCAATATATTTTGGGCTGATGACAATATGGTGCTGGATTATGATTATTTTGGTGATGTAATTTGTTTGGACACAACTTGCAGAACAGACAGAGAACTTCGACCATTTGTACAATTTATAGGTGTTAATCATCACAAACAAGTGGTGATCTTTGCAGCTGCACTTCTATATGATGATACCACGGAATCATTTAATTGGTTATTGCGTACTTTTATTAATGCCATGTCTGGGAAAAAGCCGAAGTCTATTCTCACAGAACAAGAAGCTGTAATTATTGAAGCTGTCAATACAATTCTGCCTGAAACAAACCATTTTACTTGTGTATGGCAGCTGTATGAAAATACTTTAAGACACCTCAGTCATGTAGTTAAGGATGCTAATTCTTTTGCCAGCGATCTCCGATGCTGTATTTATGACCACAAATACGAGGAGGATTTTTCTCATGCTTGGGAGGCTATGTTGGAGAAGTATGATCTGCAGCAAAATGAATGGTTGAGATGGATGTACAGAGAAAGAGAGAAATGGGCAGTTGTCTTTGGTCGAAATACATTTTTTTTGGATGCAAAAGGCTCTCATTTAGGTGAGATTTTGTCTCGTAAATTTAGAAGTTATTTAAATTCTGACCTTGATGTCATTCAATTCCTGAAGCATTTTGAAAGGGTAGTGGATGAACTACGTTATGAAGAAATTGAAGCTAATGATGAGATGAGGAGACGTTTGCCAAGACTAATGGGTAATGTTGTTTTGTTAAAGCATGGAAGTGATGCATATACTCCAAGGGCATTTGAAGTATTTCAGCAAGGATATGAGAAATCTTTAAATGTTGTTGTTAACCAATTCAGTAGGAATGGATCACTGTTTGAGTATAAAGCAAATACGTTTGAACATATTAGACAATATAATGTCACATTCAATTCTTTAGATGATACAGTTTTGTGCAGTTGTATGCAGTTTGAGCGTGTTGGATTTTTGTGTAGCCATGCACTAAAAGTGCTTGACCATATGAACATAAAAGTGGTTCCATCTCAGTACATCTTAAAGAGATGGACAAAAGAGGCAAGGTTGGGAACTGTCAAGGACGTTGGGCAATTTAACATGCAAGATAATCCTAAGATGATTGTAGCAAGCCGTTACAAAGATTTGTGCCACAGGCTGCTCAAGTTTTCAGCAAGGGCCTCCGAATCTGTGGAAGGTTATCAATTTGCTCGGATGAAACTTGATGAGATAATGGAAGGAGTCGAGAGAATCTTGGCATTGAAAGGTGCAGAAACTCAGATTATCACCTCCAGCAGCGCTGATGCAATTGCTCCTGAGAATGAGCCTGCAGACATCTTTCTCAATGGACAGGCAATGGAAGATCAAAATGAAAGTAACAGAATGGAAGAAGAAAAAGAAGGGAGCTCTACACCTGTTAGAGGCCATCAAACTACTATGCACTGTAATGGATTAGACACTCAAAGGGTTCTAGATGTAGAAGTTTCTCCGCCAGATACTGTTGCCTGCATTTCAAGTCCCTCTTCTGCCTATGTTTCATCTCAATGTACAACATCAAATCCCATCATGCAGGGACTGTATAATTTTGAAGCCAACCATGTAGTTCATTGCATGTATGAACAGTCCAATCTTGCGCTGGACTCCCAATCTAATGATAACATGTACCATCCACAAAACTTCTTTTCTACCCAACAGGATTCTCCCGGCCAACCTCAACTGCTGCAGGAGCCTGTAATTCAAAGCATGTACCAGCATTCCATCCGCAACACTAATCAGATGAGACAGGTAATTGATATCCAAAATCCACATTCATCTTCATTCCTGCTCTATGATCGTAAATACAGAACTTCAGACGCTGCATAA 2655 0.3932 MDGDDNDLGSAHEENVEVRSEISNNLDLNVEQNCCSPKVIHDNGAQSGHASVDEPSTSNVLGTGTEFESDEHAYGFYNKYARLLGFSVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRDVNVKKHRKETRTGCLAHMIITRQPDGKYRVTNFEAQHNHDNINPSKAHMLMLQNELSVAQGVEADPKNTIGPPKSKSALEIMDRKFAVRVSLDQVCMDFDNHLQSERDRDMNEGEAGRLLGYFQRQHFENPTFFYFLQLDVDDKVSNIFWADDNMVLDYDYFGDVICLDTTCRTDRELRPFVQFIGVNHHKQVVIFAAALLYDDTTESFNWLLRTFINAMSGKKPKSILTEQEAVIIEAVNTILPETNHFTCVWQLYENTLRHLSHVVKDANSFASDLRCCIYDHKYEEDFSHAWEAMLEKYDLQQNEWLRWMYREREKWAVVFGRNTFFLDAKGSHLGEILSRKFRSYLNSDLDVIQFLKHFERVVDELRYEEIEANDEMRRRLPRLMGNVVLLKHGSDAYTPRAFEVFQQGYEKSLNVVVNQFSRNGSLFEYKANTFEHIRQYNVTFNSLDDTVLCSCMQFERVGFLCSHALKVLDHMNIKVVPSQYILKRWTKEARLGTVKDVGQFNMQDNPKMIVASRYKDLCHRLLKFSARASESVEGYQFARMKLDEIMEGVERILALKGAETQIITSSSADAIAPENEPADIFLNGQAMEDQNESNRMEEEKEGSSTPVRGHQTTMHCNGLDTQRVLDVEVSPPDTVACISSPSSAYVSSQCTTSNPIMQGLYNFEANHVVHCMYEQSNLALDSQSNDNMYHPQNFFSTQQDSPGQPQLLQEPVIQSMYQHSIRNTNQMRQVIDIQNPHSSSFLLYDRKYRTSDAA 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3930g00006 884 MobiDBLite consensus disorder prediction 49 64 - -
Pral3930g00006 884 SMART 26again6 577 604 IPR006564 GO:0008270
Pral3930g00006 884 MobiDBLite consensus disorder prediction 721 735 - -
Pral3930g00006 884 MobiDBLite consensus disorder prediction 39 64 - -
Pral3930g00006 884 Pfam FAR1 DNA-binding domain 76 161 IPR004330 -
Pral3930g00006 884 MobiDBLite consensus disorder prediction 719 741 - -
Pral3930g00006 884 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 680 IPR031052 GO:0006355
Pral3930g00006 884 ProSiteProfiles Zinc finger SWIM-type profile. 566 602 IPR007527 GO:0008270
Pral3930g00006 884 Pfam MULE transposase domain 286 380 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3930g00006 Pral-Chr3930 113024 116762 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral3930g00006 MULE 2.4e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3930g00006 - K17604 gmx:100809803 1299.26