Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral392g00001 ATGACTAAGAAGATTACATGGAAGTCTATCATCTTCGTCCTAAACTGTTACAGGACCGATTACCCCACCTTGCAGGAAAAACAACCTTTGAAACGAGGTTCATTTCAGAGGTTGTGCCTCTCGGACATAAGCAATTCCAGCTCATCTCAAGCCATTGACGATCTCTCAATTTCTCTTGCCGGTTCAAAACTTCACGTATTCAGCCTAGAGGAGCTTAGGGAGGCAACCCATAATTTCTCATGGAGCAATCTGCTTGGTGAAGGAGGGTTTGGACCCGTGCACAAGGGATTTTTTGATGACAAACTTAGGCGTGGATTGAAAGCTCAGCCTGTAGCTGTCAAACGCCTCGACCTAGGTGGCTTGCAAGGTCATAGGGAATGGCTGGCAGAGATTATCTTCCTCGGACAGCTGCAGCATCCGCATCTTGTTAAGTTGATTGGGTACTGTTATGAGGAGGAACATAGGCTTTTGGTTTATGAGTACATGCCAAGAGGAAGCTTGGAGAACCAGCTCTTCAGAAGGTACTCTGCTGTCTTGCCATGGTCAACCAGGATGAAAATTGCATTAGGTGCAGCCAAGGGCCTGGCCTTCCTTCACGAAGTACATAAACCAGTCATTTACAGAGACTTCAAAGCGTCAAACATTTTGCTGGATTCGGATTACACAGCCAAACTGTCAGATTTCGGGCTGGCAAAGGATGGTCCGGAAGGCGAAGAAACACATGTAACAACACGCGTAATGGGAACACATGGCTATGCTGCTCCTGAGTATGTCATGACAGGTCACCTCACAACGAAGAGCGATGTGTATAGCTACGGCGTGGTTCTGTTAGAATTGCTCACAGGGAAACGGGTGGTGGATAAGACCAGGCCCAGCAAAGAACATAGCTTGGTGGAGTGGGCAAGGCCTATGTTAAGGGATCCCAAAAAGCTGTATCGAGTCATAGATCCCAGATTGGAAGGTCAATTTCCTGCGAGAGGAGCTCGCAAGGTGGCTGCTTTGGCTTACAAATGCTTGAGCCACCACCCAACACCGAGGCCCACCATGTCCGATGTGGTTGCCATATTGGAGACACTTCAGGGCTTTGACGATGTTTTCATAGGACCGTTCGTGTATGTGGCCGTAAGCGAAGGCCAAAAAGAAGCGTAA 1149 0.4822 MTKKITWKSIIFVLNCYRTDYPTLQEKQPLKRGSFQRLCLSDISNSSSSQAIDDLSISLAGSKLHVFSLEELREATHNFSWSNLLGEGGFGPVHKGFFDDKLRRGLKAQPVAVKRLDLGGLQGHREWLAEIIFLGQLQHPHLVKLIGYCYEEEHRLLVYEYMPRGSLENQLFRRYSAVLPWSTRMKIALGAAKGLAFLHEVHKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEETHVTTRVMGTHGYAAPEYVMTGHLTTKSDVYSYGVVLLELLTGKRVVDKTRPSKEHSLVEWARPMLRDPKKLYRVIDPRLEGQFPARGARKVAALAYKCLSHHPTPRPTMSDVVAILETLQGFDDVFIGPFVYVAVSEGQKEA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral392g00001 382 FunFam Probable serine/threonine-protein kinase PBL8 162 369 - -
Pral392g00001 382 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Pral392g00001 382 Coils Coil 375 382 - -
Pral392g00001 382 CDD STKc_IRAK 85 359 - -
Pral392g00001 382 ProSiteProfiles Protein kinase domain profile. 79 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral392g00001 382 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Pral392g00001 382 PANTHER OS01G0588500 PROTEIN-RELATED 47 360 - -
Pral392g00001 382 FunFam Serine/threonine-protein kinase BIK1 45 161 - -
Pral392g00001 382 Pfam Protein tyrosine and serine/threonine kinase 82 355 IPR001245 GO:0004672|GO:0006468
Pral392g00001 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pral392g00001 382 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral392g00001 Pral-Chr392 3819 6574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral392g00001 65 356 Glycoside Hydrolase AT3G07070 55.254 2.51e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral392g00001 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral392g00001 - - gmx:100802636 610.527