Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3928g00018 ATGGGGTTTGACGGTTTAGTTAGGAGCAATAGTAGAAACTACAGCTGTGGGAGTGCAAGAGTTGTGGCTGATATTTCTCCACACAATCTCTATATCCCCAGTGGTTCAATTGTTGAGCCAACTCTGCATTCTCCCTCTATTTCAGCTCAACAGAAAATGGAGGGCCATGGTGATATGGGTCTTATTGGGGAATTTGATCATAATTTGATGGGTAGGATGAGGGATGATGAATATGAGAGTCGGTCTGGGAGTGATAATTTCGAAGGAGTTTCCGGTGATGATCAGGACGCCGGCGATGATCAGCCTCAGAGAAGAAAGAAATATCACAGACACACTCCTCATCAAATTCAAGAGCTTGAAGCATTCTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAGAGGACAGAACTTAGTAAGAGGCTGGGCTTGGAGAATAAACAGATCAAGTTCTGGTTTCAAAATAGAAGAACACAAATGAAGACTCAAATAGAACGCCATGAGAATATGATTCTCAGACAAGAGAATGAGAAACTCCGAGCTGAGAATAGTATGATAAAGGAAGCCATGTCCAACCCGATGTGTAATAGATGTGGTGGCCCAGCGATTCCTGGCCAAATTTCATTTGAGGACCACCATCTCAGAATTGAAAATGCTCGGCTTAAGGATGAATTGAATCGAATATGTTCCTTGGCGAACAAGTTCCTGGGTAGGCCACTCTCGTCCTTGGCCAGCCCCACTGCTGTTCTGGGTTCAAATTCTGGTCTTGAACTTGCTATAGGAAGGAGCGAAATTGGTGGTTCAAGTGCTCTAGGTTCTTCCCTGCCAATGGGGCTTGATCTAGGGGAAGGCATTCTGGGCACACCTTCAGTGATGCCCCGGATCAGATCTCACATGGGAATGATGGGTGGCGAAATTCAGGCGGATAGGTCTATGCTCATTGATCTTGCACTGTCTGCTATGGAGGAATTAATGAAGATGGCTCGGGCAGATAGCCCTCTCTGGATTAAGTGTTTGGGTGGTGAGAAAGAGATACTGGACCACGAGGAGTATGACAGGTTAATTTCTCCTTGTATTGGCCCGAAACCGGCTGGTTTTATAACTGAAGCTACAAGGGAAACTGGGATAGTCATCATAAACAGTCTAGCCCTCATGGAGACATTGATGGATGCAAACCGGTGGGCAGAGATGTTTCCCTCCTTGATAGCTAGAGGTGCAACCGTTGATGTAATATCCAATGGTATGGGTGGAACCAGAAATGGTGCTTTGCAAGTGATGCATGCTGAGGTTCAATTGCTTTCGCCGCTTGTCCCTGTGCGTCAATTGAGATTTCTCCGGTTCTGCAAGCAGCATACAGAAGGTGTGTGGGCTGTGGTTGATGTTTCGGTTGAGATGGGCCATAGTTCAATCAATGGCCACCCGTTCGTGAGCTGTAGGAGGCTTCCTTCAGGCTGTGTTGTGCAAGATATGCCCAATGGTTACTCAAAGGTTACATGGGTTGAGCATACACAGTATGATGAAAGCGTTGTTCACCAACTCTACCGGCCAGCGGTGAATTCCGGCTTTGGCTTCGGTGCTCATAGGTGGATTGCCACCCTTCAAAGGCAATGTGAATGCTTGGCAATCCTCATGTCATCTTCTATACCCAATGAGGATCATACAGCATTAAGCCAAGCTGGTCGGAGAAGTTTGTTGAAGCTGGCACAGCGCATGACCAATAACTTCTGTTCTGGGGTTTGTTTATCGTCGGCACGCAAGTGGGACAGCCTTCACATTGGCACACTTGGTGATGATGTGAAAGTGATGACCCGGAAGAATGTGGACGACCCCGGCGAGCCTCCGGGGATTGTGCTGAGCGCCGCGACTTCCGTTTGGATTCCGGTGTCCCGGGAGAGTCTGTTCAATTTCCTGCGTGATGAACAGCTGAGAAGTGAGTGGGACATTTTGTCGAATGGGGGACCAATGCAGGAGATGGTCCATATTGCCAAAGGTCAAGGTTCTGGAAATTGTGTGTCTCTCCTTCGTGCCAGCGCGGTGAATCCTAACGAGAGCAATATGGTAATTCTGCAAGAGACATGGACCGACCCGTCGTGCTCGGTCGTGGTGTATGCACCGGTCGACGTGCAATCCTTGAACGTCGTGATGAGCGGCGGAGACTCCGCCTACGTTGCTCTCTTGCCTTCAGGTTTCGCCATTCTACCCGACGGCCGCCAATCCAGCTTCGGCGGCAGTTTACTCAAAGGTGGCAGCAGCCCCGACGGAGGCGGTGACCACCAAGGCAGCCTCCTCACAGTAGGGTTCCAGATTCTGGTAAACAGTCTGCCGACGGCAAAACTCACGGTGGAGTCCGTGGAGACGGTGAACAACCTCATCTCCTGCACCATTCAGAAGATCAAAAGCGCCCTGCGACTTGCATGA 2415 0.4932 MGFDGLVRSNSRNYSCGSARVVADISPHNLYIPSGSIVEPTLHSPSISAQQKMEGHGDMGLIGEFDHNLMGRMRDDEYESRSGSDNFEGVSGDDQDAGDDQPQRRKKYHRHTPHQIQELEAFFKECPHPDEKQRTELSKRLGLENKQIKFWFQNRRTQMKTQIERHENMILRQENEKLRAENSMIKEAMSNPMCNRCGGPAIPGQISFEDHHLRIENARLKDELNRICSLANKFLGRPLSSLASPTAVLGSNSGLELAIGRSEIGGSSALGSSLPMGLDLGEGILGTPSVMPRIRSHMGMMGGEIQADRSMLIDLALSAMEELMKMARADSPLWIKCLGGEKEILDHEEYDRLISPCIGPKPAGFITEATRETGIVIINSLALMETLMDANRWAEMFPSLIARGATVDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQLRFLRFCKQHTEGVWAVVDVSVEMGHSSINGHPFVSCRRLPSGCVVQDMPNGYSKVTWVEHTQYDESVVHQLYRPAVNSGFGFGAHRWIATLQRQCECLAILMSSSIPNEDHTALSQAGRRSLLKLAQRMTNNFCSGVCLSSARKWDSLHIGTLGDDVKVMTRKNVDDPGEPPGIVLSAATSVWIPVSRESLFNFLRDEQLRSEWDILSNGGPMQEMVHIAKGQGSGNCVSLLRASAVNPNESNMVILQETWTDPSCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGRQSSFGGSLLKGGSSPDGGGDHQGSLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKSALRLA 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3928g00018 804 FunFam Homeobox-leucine zipper protein GLABRA 2 314 537 - -
Pral3928g00018 804 SMART START_1 314 538 IPR002913 GO:0008289
Pral3928g00018 804 SUPERFAMILY Homeodomain-like 90 162 IPR009057 -
Pral3928g00018 804 ProSiteProfiles START domain profile. 305 541 IPR002913 GO:0008289
Pral3928g00018 804 SMART HOX_1 104 166 IPR001356 GO:0003677
Pral3928g00018 804 ProSiteProfiles 'Homeobox' domain profile. 102 162 IPR001356 GO:0003677
Pral3928g00018 804 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 101 801 IPR042160 -
Pral3928g00018 804 Pfam Homeodomain 105 160 IPR001356 GO:0003677
Pral3928g00018 804 SUPERFAMILY Bet v1-like 307 538 - -
Pral3928g00018 804 CDD homeodomain 105 162 IPR001356 GO:0003677
Pral3928g00018 804 ProSitePatterns 'Homeobox' domain signature. 137 160 IPR017970 GO:0000981|GO:0006355
Pral3928g00018 804 Pfam START domain 315 538 IPR002913 GO:0008289
Pral3928g00018 804 Coils Coil 156 191 - -
Pral3928g00018 804 FunFam Homeobox-leucine zipper protein HDG1 91 178 - -
Pral3928g00018 804 SUPERFAMILY Bet v1-like 566 798 - -
Pral3928g00018 804 CDD START_ArGLABRA2_like 309 537 - -
Pral3928g00018 804 Gene3D - 92 178 - -
Pral3928g00018 804 MobiDBLite consensus disorder prediction 76 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3928g00018 Pral-Chr3928 233589 240449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3928g00018 1 801 Homeobox Transcription Factor Family AT3G61150 55.730 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pral3928g00018 START 1.1e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3928g00018 K09338 - gmx:100785102 1263.06