Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3928g00005 ATGGTGAAGCGGATAACACTCTCACGGATCATCGTCTTCTTCCTTCTATCATCGGCCGTCGATGCCCAGTCAAATTCGCTACCGGCGGCTTCTCCGATTGCTCCATTTCACAACTGGGACCAGTCATTTGCTCCCGTCGTTGTGGCCCTCGTTTGCGCCTTCTTCTTCATTGGCTGCTTCGCCGTCTACCTCCACCACTGCTCTGACATGGAACTCGCCGTCGGAGATCCAACTGGCGCCCCAGCCAATTGTTCTTCAAGAGGCCCGCAAGGTGTGGACCCGAAATTACTCGATACCTTCCCCATCCTCGTGTATTCCGCTGTGAAAAACCTCAAATTTGGGAAAACCGCTGCGCTTGAGTGTGCTGTGTGCTTGAGCGAGTTCGATCACCAAGATACGCTTCGATTGCTTCCGAAATGTAATCACGTGTTTCACCCTCAATGCATCGACGCCTGGTTCGCCTCCCACGAGACTTGCCCAGTTTGTCGCGCGAGGCTGAAGCCGACGGAGGAGGAGCCCCGGCAAGGTGAAAACGAAGTCGTGATAGTAATTCCGAATGAGCCAAATTCACACCAGGTGTTCGATGAAAGTTCTGAGGGTAGAACGGAGCTTCATTTAGCAGACAGAACAAGTTTGGAAAGGTGTCATTCAACGGGTCACTCTTTGGGTTTGGGTGAAATCAAAGGAAAGGAGACGGTCGAGTACAATCTCAGGCTGTCGGAGGACGTGATGAGGGGACAGATTCCGGTGAATCACGGAAAAATGCGGCGGTCGGCGAGCTGCGATGTGTTCCGTGGACGGCATGGTGATCAAGAGAGCAGTAGAGAGAATTTGATTCTTTGA 843 0.5255 MVKRITLSRIIVFFLLSSAVDAQSNSLPAASPIAPFHNWDQSFAPVVVALVCAFFFIGCFAVYLHHCSDMELAVGDPTGAPANCSSRGPQGVDPKLLDTFPILVYSAVKNLKFGKTAALECAVCLSEFDHQDTLRLLPKCNHVFHPQCIDAWFASHETCPVCRARLKPTEEEPRQGENEVVIVIPNEPNSHQVFDESSEGRTELHLADRTSLERCHSTGHSLGLGEIKGKETVEYNLRLSEDVMRGQIPVNHGKMRRSASCDVFRGRHGDQESSRENLIL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3928g00005 280 CDD RING-H2_EL5-like 120 163 - -
Pral3928g00005 280 Pfam Ring finger domain 120 163 IPR001841 -
Pral3928g00005 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 172 IPR013083 -
Pral3928g00005 280 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Pral3928g00005 280 SMART ring_2 121 162 IPR001841 -
Pral3928g00005 280 PANTHER RING FINGER DOMAIN-CONTAINING 41 170 - -
Pral3928g00005 280 FunFam E3 ubiquitin-protein ligase ATL6 81 169 - -
Pral3928g00005 280 SUPERFAMILY RING/U-box 120 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3928g00005 Pral-Chr3928 78454 79785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3928g00005 10 280 Rapid Response to Elicitors AT3G05200 36.755 1.32e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3928g00005 K10664 - pcin:129287042 240.35