Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3917g00003 ATGGCGCCCCTGAGAGTGCAAGAGCTCTGCAGAATTGCTCCGCCACCATCTTCAGCAAAGTCCTCCTTCTGTCTCACCTTCTTCGACTTGCTTTGGCTCAGACTTCATCCTGTTGAGCGTCTCTTCTTCTTCTCTGTTCCTCACTTAAACCCCTCTTCCTTCTTCCATTCCATCGTTCCAAAGCTCAAGCGCTCCCTCTCTCTCACTCTGAAACACTTTCTTCCTCTCGCCGGTAACATCGTTTGGCCCTCCGACTCACCCAAACCCATCGTTCTACACACTCCCGGAGATGCCGTCTCTCTCGCCATAGCTGTTTCTGATTGTGATTTCGACCAGGTCTTGGACAAATCCCCTCGTGACGCATCACTATCTCGTGCTTTTGTTCCCAACTTGGATTCTTCTGATTCATTTGCGTCGGCTATTTCCCTGCAAATCACTCTGTTTCCCTACAAAGGATTTTGCGTAGGGATGAGTTCGCATCATGCCTGTTTAGATGGCAAATCATCGACTATGTTCATGAAGGCCTGGGCTTATCTATGTCGAACAGAAGCAGAGAGTGAATCTTCTGGTTTGCTTCCTCAAGAACTAGAACCATGCTTAGACAGGGAAGTTATCGTCGATCCACGTGGCATTGGAGTTGCATACATTAATGGGTGGTCAGGTTTAGATCCAACTCAGAATCAGAAGAACCAGCCATTAAGCTTGAAGATTCTCTCCGGCATGTTCCCGCCATTGGTGGACGACTCTGCTCGAGCCATATTCGAGCTCAAACGTGGGGATCTAAACAAGATAAAAGAAAGGGTGTTGCTGAAATGGGAAAATCACGAGACCAAAGAAGAAAGAGAAGACTCATCAAAACTTCCGAAGCCTCCAATTTTGTCAACCTTTGTGCTTACAACTTCTTATTTTCTATTCTGCATCGCAAAAGCCATTGACAGAAGTGAAACTAAGAGGAAGAAACTGTTATTCTGTTTCTTTGCTGATTGCAGAACAAGGTTAGAGCATCCAATCTCTGAAAACTATTTTGGGAATTGTGTGATGTCTCAGATAATAGAAACACAGCCAGAAGACTTCACAGATGAGGATGGGGTTGTCATCATTGCCAAGAAAATACTAAGAAAGATAAGGAAAATACAGAAAGAGAAAGGAGCGCTTGATGGAGCAGAGACATTGTTTTCTCGGCGTTCTTCGCAATCTGCAGAAGGAAACGAAGTTCAGTACATAGCCGTAGCCGGGTCGAGCCGGTTCGGGGTTTATGAGACTGATTTTGGATGCGGAAGGCCGGAGAAGGTGGAGATAACTTCAGCAGATAGAGGTATAACAATGGCGATGGCAGAGAGTAAAGATGGTGATGGTGGGGTGGAAGTAGGACTTGTATTGAAGAAGCATGTGATGGATCAATTTGCCTCCTTGTTTCCAGCAGTGCTTGTGTCTTTTTGA 1440 0.4576 MAPLRVQELCRIAPPPSSAKSSFCLTFFDLLWLRLHPVERLFFFSVPHLNPSSFFHSIVPKLKRSLSLTLKHFLPLAGNIVWPSDSPKPIVLHTPGDAVSLAIAVSDCDFDQVLDKSPRDASLSRAFVPNLDSSDSFASAISLQITLFPYKGFCVGMSSHHACLDGKSSTMFMKAWAYLCRTEAESESSGLLPQELEPCLDREVIVDPRGIGVAYINGWSGLDPTQNQKNQPLSLKILSGMFPPLVDDSARAIFELKRGDLNKIKERVLLKWENHETKEEREDSSKLPKPPILSTFVLTTSYFLFCIAKAIDRSETKRKKLLFCFFADCRTRLEHPISENYFGNCVMSQIIETQPEDFTDEDGVVIIAKKILRKIRKIQKEKGALDGAETLFSRRSSQSAEGNEVQYIAVAGSSRFGVYETDFGCGRPEKVEITSADRGITMAMAESKDGDGGVEVGLVLKKHVMDQFASLFPAVLVSF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3917g00003 479 Pfam Transferase family 11 470 - -
Pral3917g00003 479 PANTHER - 4 473 - -
Pral3917g00003 479 Gene3D - 4 231 IPR023213 -
Pral3917g00003 479 Gene3D - 246 477 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3917g00003 Pral-Chr3917 78887 80418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3917g00003 4 468 Monolignol Biosynthesis Gene Families AT5G48930 21.667 6.66e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3917g00003 - - pcin:129292507 660.603