Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3916g00030 ATGAACCCTAAAGCATGCATTGATTATTATCCATGGAAGCTAATTCAACAGCCAAAAGATTCAGAACAATCAAAAGATGCTATGAGTCAAGATTCAAAATCAACTAATTATGCAGAATTAACTCAGAACAGCACAAGTTATCAAGATATTGGCCCGAACTTTTGCTGCATCTCCAAATTAAGTGAGAGGAAGGAAGGGCGAAATTGCTTGATCCAAAGTAAGTATAATGCCATTCTAAGGAAAATAAGGAGATGGAAGGAAGATCACTCCATGATTTTGAAGTCAAAAGATCTGAATAATGTAGTTGTCACGTCTCACCAATTGATTGAATCATTAGAGAGTATGCTGCATTTGAACATAGAGGAACAAGGGTACAATTTTGTGCTGATGGATCTCAAAATTCTAACAAATAAGGCACAAATCAAGGATGAGTTCAAGCAATTTCTAGTTCAAAATAGGCATCCTTTTGATCATAAATCTATCTCCTTTCAGTCCAGTGAATTAGAGGATACCATTGGTGGAATCAGAAGAGGTAGTTTCAGCAGAACATCAGAAAAGCACATCTTGGATTTAGTCTGTCCAGAACTGCTCCAAGATATTAAATGTATTGCAAACTTAATGTTTGTGTTAGACTATAGCCGAGAATGTTACAATGGCTACACAAATATTCGAAGGCAAGCCTTAAATGAGTGTCTGCTTCACCTTGAAACAGAAAGACTGAGCATTGAAAATGTTTCAAAAATGGAATGGGATAGTTTGAACTCCAAAATCAAAGGATGGATTTATCAAGTAAAAATATTTGTTAGGGTGTATCTTGCAAGGGAAAAGTGGCTTAGTGAGCAGATTTTTGGAGACACTGATGAGGCCAGTTTGATTTGTTTTGTTGGTGCATCAAAGGCTTTAATAATGTGGTTTCTAGAATTTTGTGAAGCTATATCTATTGGCCCTCATAATCCTGAGAGAATATTTCGTTTTCTTGACATGTACCAAGTTCTGGCAGATCTTATACTAGACCTAGATGCCATGTATTCAGGTAAGGTTGGTTTTCCAGTTAGAATCAAGTGTCAAATGGTTCTAAATAGATTAGGTGCTTGTGTGGGGTCAATATTTCTTGAATTTAAAAATGTCATTGCATCAAATCCATCTCGATCTCCTTTCCCTGGTGGTGGGATTCATCCTTTGACCTATTATGTCATGAGCTATATTAGCTATCTCTTGGACTACAATAACACCCTTAATATACTGAATGGTGAAGAGGAATTAGAGTATGATATTTCACTGTACCCATCAATGAGCCATGACACATCGCAAGATAGTGACATCCTGGGATCTTCACATAGCAGTGTTTCCTCAGTCACAATCCACTTTCGATCAATCACTTCAATCTTGGAACTGAAGCTTGAGAACAAGTCCAGGTTATATAAGGACGCTGCTTGCCAACAATTGTTCTTAATGAACAATATGCATTATATGGCTCAAAGGGTCCAAGAATCTCAACTGAAGCATATTTTTGGAGATGAATGGGTTCGAAAGTGCATCTACAAGTACCAGCAACATGCATGGAACTATGAGCAAACAAGTTGGAGTTCGGTTCTCTCTTTGCTTAGTGATGAGAGAATTCAATTATCTAGGTCACACAATCTTCTCAAGACTATATTGAGGAACTTCTATGTTGCCTTTGAGGATATTTACAGGATCCAAACTGCTTGGGTGATCCCAGATCATTTATTGCGTGAGGGCATGCGGATCTCTATATCCCAAAAGCTAGTTCATGCTTATCAGACATTCTTAAGGAAGTATTATAGTTACGTAGGTGACAAACACATCAAATACAATGTTTGTGATATTGAAACTTCCCTTTTGGATTTCTTTGGGGGATCCCATAAGTCGTGGCCAAGTCCCAAAAGGTTTGCCTATTGA 1920 0.3755 MNPKACIDYYPWKLIQQPKDSEQSKDAMSQDSKSTNYAELTQNSTSYQDIGPNFCCISKLSERKEGRNCLIQSKYNAILRKIRRWKEDHSMILKSKDLNNVVVTSHQLIESLESMLHLNIEEQGYNFVLMDLKILTNKAQIKDEFKQFLVQNRHPFDHKSISFQSSELEDTIGGIRRGSFSRTSEKHILDLVCPELLQDIKCIANLMFVLDYSRECYNGYTNIRRQALNECLLHLETERLSIENVSKMEWDSLNSKIKGWIYQVKIFVRVYLAREKWLSEQIFGDTDEASLICFVGASKALIMWFLEFCEAISIGPHNPERIFRFLDMYQVLADLILDLDAMYSGKVGFPVRIKCQMVLNRLGACVGSIFLEFKNVIASNPSRSPFPGGGIHPLTYYVMSYISYLLDYNNTLNILNGEEELEYDISLYPSMSHDTSQDSDILGSSHSSVSSVTIHFRSITSILELKLENKSRLYKDAACQQLFLMNNMHYMAQRVQESQLKHIFGDEWVRKCIYKYQQHAWNYEQTSWSSVLSLLSDERIQLSRSHNLLKTILRNFYVAFEDIYRIQTAWVIPDHLLREGMRISISQKLVHAYQTFLRKYYSYVGDKHIKYNVCDIETSLLDFFGGSHKSWPSPKRFAY 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3916g00030 639 SUPERFAMILY Cullin repeat-like 104 624 IPR016159 -
Pral3916g00030 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 71 625 IPR004140 GO:0000145|GO:0006887
Pral3916g00030 639 Gene3D Exocyst complex component Exo70 96 633 - -
Pral3916g00030 639 Pfam Exo70 exocyst complex subunit 260 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3916g00030 Pral-Chr3916 460941 464123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3916g00030 139 630 EXO70 exocyst subunit family AT3G29400 41.300 2.08e-130 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3916g00030 K07195 - gmx:100799102 569.311