Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3916g00004 ATGGATGCCCAGGTAGCTTCGCAAGCATCACCTTCTTATCTCCCTTCACTCCAAAGCAATGACCCATCATTCGCACCTGTGGTCGCGGCCCTCGGTTGCTCCTTCTTGTTCGTCGTCTTCTTCACCTTCTATCTCCGCTACTGCTCCGACACCAACCTCACCGTCGCAGACCAGCCCGTAGCCGTCACCGTCAATTATTACAGACCCCACGAATCTCAAGGTGTCGACTCCAAATTACTTCACACCTTTCCCATCCTCACGTATTCCAACCTTAAAGATCTCAAGCTTGGTGGGAATGCCCCGCTGGAGTGTGCGGTGTGCTTGATCGAGTTCAAACACGACGACATGCTCCGATTGCTTCCGATATGTAACCATGTCTTCCACCCTGATTGCATCAAGAAGTGGTTAGCGTCTCACGTGACCTGTCCAGTTTGTCGAGCGGCGTTGAGGCCGGAGCGCCGCCAAGGTGAGGAGGAGATGGCGGTGGTGACTCAGAACGAGGCGAGTGAAGCCGAGGAGGAGGTTGCTGATACATGGGCAAGACAAACGACGAGGGCGGCGGCGGCGGAGGAGGAGGGTAGTTTTGGGGAGAGAGGATTGAGGAGGAGTCATTCAACGGGTCACTCTTTGGATTTGGAGGAATGGAGAGGGAAGGATGTGGAAATGTACATTCTGATGAGGTTGAGGGAGGATGCGAGGAAACAGATGATGGTGGATCACAGCGGAATTCTGGGTTGCAGTACCCCGACGAACTCCGATGTGTTTCGGGGACGACGTGAAGATGAAGGAATCAGTGGAGGACGGTCGGTTCTTTCTGAATGA 822 0.5401 MDAQVASQASPSYLPSLQSNDPSFAPVVAALGCSFLFVVFFTFYLRYCSDTNLTVADQPVAVTVNYYRPHESQGVDSKLLHTFPILTYSNLKDLKLGGNAPLECAVCLIEFKHDDMLRLLPICNHVFHPDCIKKWLASHVTCPVCRAALRPERRQGEEEMAVVTQNEASEAEEEVADTWARQTTRAAAAEEEGSFGERGLRRSHSTGHSLDLEEWRGKDVEMYILMRLREDARKQMMVDHSGILGCSTPTNSDVFRGRREDEGISGGRSVLSE 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3916g00004 273 MobiDBLite consensus disorder prediction 191 208 - -
Pral3916g00004 273 FunFam E3 ubiquitin-protein ligase ATL6 64 152 - -
Pral3916g00004 273 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Pral3916g00004 273 PANTHER RING FINGER DOMAIN-CONTAINING 14 155 - -
Pral3916g00004 273 CDD RING-H2_EL5-like 103 146 - -
Pral3916g00004 273 MobiDBLite consensus disorder prediction 250 273 - -
Pral3916g00004 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 152 IPR013083 -
Pral3916g00004 273 MobiDBLite consensus disorder prediction 186 208 - -
Pral3916g00004 273 Pfam Ring finger domain 103 146 IPR001841 -
Pral3916g00004 273 Coils Coil 154 174 - -
Pral3916g00004 273 SUPERFAMILY RING/U-box 103 152 - -
Pral3916g00004 273 SMART ring_2 104 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3916g00004 Pral-Chr3916 55277 56098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3916g00004 3 239 Rapid Response to Elicitors AT3G05200 36.078 1.57e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3916g00004 K10664 - rvl:131302375 162.54