Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3916g00003 ATGATCACCAGAATTACACTCTCACATATTCTCGTCTTCTTGCTTCTCTCGTCGGCCGTCGATGCCCAGTCAAGTTCGCCACCGGTGGCGGCTTCTCCTACTGCTTCATCCCACAACCGGGACCCGTCCTTTGATCCTGTGCTTGTGGCTTTTGTTTGCGTCCTATTGTTCGTCGCCTTCATCTCCATCTTCCTCCGTCACTGCTCCAACATGGACCTCGGCGCCGGAGGCCTAACTGGCCCCGCTGCTAATTGTTCGTCAAGTGGTCCTCAAGGGATCGACCCAAAATTACTCAACACGTTCCCCATCCTCGTGTACTCCGCCGCCGAGAAAGACCTCAGATTTGGGAAAGCCGTGAACGAGTGCGCGGTTTGCTTGTGCGAGTTCGATCAACACGATACGCTCCGATTGCTTCCGAAATGTAACCACGTGTTTCACCCTCAATGCATCGACGCCTGGTTGGCCTCCCACGTGACTTGCCCTGTTTGCCGTTCGAGGCTGAAGCCGGAGGAGGAGCACAACGGAGGCAACGACGAAGTCGTTATAGTAATTCCGAATGAGGTAAATGCTCACCAGATGTTCGATGAAAGTTCTGCGAGTAGAACGGAGCTTAATTCAGCAGAGCTAAGAAGTTTGGGGAGGTGTAATTCAACGGGTCATTCTCTGGGTTTTGGTGAGATCAGTGGCAAGGAGACGGAGTCGGAGAGGTACACTGTTAGGATTCTGGAGGATGTGAAGAAACAGATCAAGACCAATCAAGGAGGAATGCGGCGGTCGGCGAGCTACAATGTGCTCCATGGACGGCCGGGCGAACAGGAAAGTACAGGGCATTTCATTCTTTGA 843 0.5291 MITRITLSHILVFLLLSSAVDAQSSSPPVAASPTASSHNRDPSFDPVLVAFVCVLLFVAFISIFLRHCSNMDLGAGGLTGPAANCSSSGPQGIDPKLLNTFPILVYSAAEKDLRFGKAVNECAVCLCEFDQHDTLRLLPKCNHVFHPQCIDAWLASHVTCPVCRSRLKPEEEHNGGNDEVVIVIPNEVNAHQMFDESSASRTELNSAELRSLGRCNSTGHSLGFGEISGKETESERYTVRILEDVKKQIKTNQGGMRRSASYNVLHGRPGEQESTGHFIL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3916g00003 280 PANTHER RING FINGER DOMAIN-CONTAINING 25 170 - -
Pral3916g00003 280 FunFam E3 ubiquitin-protein ligase ATL6 82 170 - -
Pral3916g00003 280 Pfam Ring finger domain 120 164 IPR001841 -
Pral3916g00003 280 SUPERFAMILY RING/U-box 121 170 - -
Pral3916g00003 280 CDD RING-H2_EL5-like 121 164 - -
Pral3916g00003 280 SMART ring_2 122 163 IPR001841 -
Pral3916g00003 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 170 IPR013083 -
Pral3916g00003 280 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3916g00003 Pral-Chr3916 26057 27222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3916g00003 10 265 Rapid Response to Elicitors AT3G05200 36.331 4.22e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3916g00003 K10664 - pcin:129287042 218.779