Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3914g00028 ATGACAACTACAGCTGCAATTTTCTTGGCTCTAATCTCTCTCATTTCTCATCTTCTTGTTCTTACCGCTCAGCCTGACTTCTACTTTTACACGTGCTCCAATGAAAGTGCTAACTACACAAAACCAAGTGCCTACCAAACCAACCTCAATACCCTTCTTTCTAATTTCACCTCTGACACCAAAATTGACTATGGCTTCTACAATTCCTCCTATGGTGAAAGCCCCAACACAGTTAACGCACTTGGAATGTGCAGAGGAGATGTGAAGCCAGATTCTTGTCGTAATTGCCTCAATAATGCCAAAATCCTTCTCCCAAAGCTATGTCCATATCAGAAGGAGGCATTTGGATACTATGATTTATGCATGTTTCGATACTCAAGTCATCAAATGTTTGGGATTTACCAGGACCATGACTTTTACAACTGTACTAGTAGCGATACTAATGCAGCAGATGCAAGCAAATACAACATTGCACTTGAAGTTCTAATGCAAACTCTAAGAGACAAGGCTGCCGATGGTGACTCTTATCATAAGGTGGCTGCGGCAAACGCATCAGCTGATCAATCACAAGTTGTGTATGGCCTTGTTCAGTGCATCCCTGATTTGAATAGGCAAGATTGCTTTGATTGTTTGGAGGATTCTATTTTTAATATCCCAAAATGTTGTCAGAACAAGGTCAGTGGGAGGGTCATCAAATTGAGCTGTAATATTAGATTTGAGAATTTCTTATTCTATGATCCTACACTTGTCAATTTAACAAAAATAACTCTCCCCTATACTCTTCCTCCATCAACAAATACTACTTCTCCACAAGGAAGTAGCAATAAATCAACAACTACCATTGTTGTGGTTGTGCTGATTGGTGCCATTATTGCCCTTCTCATAGCATTCTTTATGATTACAAGAAAGAAGAAAACCCATGAAACTACAACGAAGGATGATGATGAAACTAAACTAGCTGAGATTCTGCAAATCAATTATAACACCATCAACCTCGCAACTGATAACTTCTCTGATGCAAATAAACTTGGACAAGGAGGATTTGGGCCAGTGTATAAGGGTCGGCTTCCTGATGGACAAGAAGTTGCTGTGAAAATGTTGTCCAAGCATTCTAGGCAAGGAGATTTAGAATTTAAGACTGAAGTGATGTTGGTAGCAAAACTTCATCATCGGAATTTAGTAAGATTACTTGGTTTCTGTTTAGAAAAAACAGAAAGACTACTTGTCTATGAATTTCTTGCTAATAAAAGTCTTGATTTCTTTTTATTCGATCCAAATCAGCAAGCTTTTTTGAATTGGATAGTACGGTACAAGATTATAAGGGGCATTGCTCGTGGTCTGCTTTATCTTCATCAAGATTCAAGATTACGTATTATCCATCGTGATCTTAAAGCAAGCAATATTCTCTTGGATGATGAATTAAATCCTAAGATATCAGATTTTGGCACTGCAAGACTATTTAAGGCAGATCAAACTCGGAGCAATACTAATAGAATTGTGGGAACTCGCGGTTATATGGCCCCAGAATATGTACTGTACGGTCAATGTTCAGTAAAATCAGATGTATATAGTTTTGGCGTATTGGTTCTAGAGATTATAAGTGGCAAGAAAAACAGCTGCACCTTTCATGTAGAGAATACACAGCATCATCTGGACCTATTAAGTTTTGTATGGAAAAATTGGAAGGAAGGGACAACCTTAAATATAGTAGATCCCGTGATAAGCAATGGTTCAAGAAATGATATAATTAGATGCATTCACATTGCATTGCTCTGCGTTCAAGAAAATGCAGCTGATCGACCAACTATGGCCTCAGTCTCATTTATGCTGAACAGCTTCTCTTCCTCTCTCCCTGTACCTTCAGAACGTCGATTTCTTGTGAATTATAGCAGTTCATCTGAGATGATGACTTTGAGACATAACAGTTTAGAGGCAACAAGAGCAAGTGAACAAGGAAGAAACTCGAATCAATCATCACAAAATGATCTATCAATTACGGAGCTATATCCTCGCTAG 2016 0.3839 MTTTAAIFLALISLISHLLVLTAQPDFYFYTCSNESANYTKPSAYQTNLNTLLSNFTSDTKIDYGFYNSSYGESPNTVNALGMCRGDVKPDSCRNCLNNAKILLPKLCPYQKEAFGYYDLCMFRYSSHQMFGIYQDHDFYNCTSSDTNAADASKYNIALEVLMQTLRDKAADGDSYHKVAAANASADQSQVVYGLVQCIPDLNRQDCFDCLEDSIFNIPKCCQNKVSGRVIKLSCNIRFENFLFYDPTLVNLTKITLPYTLPPSTNTTSPQGSSNKSTTTIVVVVLIGAIIALLIAFFMITRKKKTHETTTKDDDETKLAEILQINYNTINLATDNFSDANKLGQGGFGPVYKGRLPDGQEVAVKMLSKHSRQGDLEFKTEVMLVAKLHHRNLVRLLGFCLEKTERLLVYEFLANKSLDFFLFDPNQQAFLNWIVRYKIIRGIARGLLYLHQDSRLRIIHRDLKASNILLDDELNPKISDFGTARLFKADQTRSNTNRIVGTRGYMAPEYVLYGQCSVKSDVYSFGVLVLEIISGKKNSCTFHVENTQHHLDLLSFVWKNWKEGTTLNIVDPVISNGSRNDIIRCIHIALLCVQENAADRPTMASVSFMLNSFSSSLPVPSERRFLVNYSSSSEMMTLRHNSLEATRASEQGRNSNQSSQNDLSITELYPR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3914g00028 671 FunFam Cysteine-rich receptor-like protein kinase 28 413 618 - -
Pral3914g00028 671 MobiDBLite consensus disorder prediction 644 671 - -
Pral3914g00028 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 670 - -
Pral3914g00028 671 ProSiteProfiles Protein kinase domain profile. 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00028 671 Pfam Salt stress response/antifungal 142 241 IPR002902 -
Pral3914g00028 671 Pfam Salt stress response/antifungal 32 127 IPR002902 -
Pral3914g00028 671 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Pral3914g00028 671 FunFam Cysteine-rich receptor-like protein kinase 10 140 244 - -
Pral3914g00028 671 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 25 130 - -
Pral3914g00028 671 Pfam Protein kinase domain 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00028 671 Gene3D Phosphorylase Kinase; domain 1 297 412 - -
Pral3914g00028 671 Gene3D - 136 244 IPR038408 -
Pral3914g00028 671 Gene3D - 25 130 IPR038408 -
Pral3914g00028 671 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Pral3914g00028 671 Gene3D Transferase(Phosphotransferase) domain 1 413 622 - -
Pral3914g00028 671 FunFam Cysteine-rich receptor-like protein kinase 10 301 412 - -
Pral3914g00028 671 SUPERFAMILY Protein kinase-like (PK-like) 321 610 IPR011009 -
Pral3914g00028 671 SMART serkin_6 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00028 671 CDD STKc_IRAK 343 611 - -
Pral3914g00028 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3914g00028 Pral-Chr3914 335865 339174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3914g00028 25 671 Receptor kinase-like Gene Family AT4G21410 45.022 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3914g00028 Pkinase 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3914g00028 - - gmx:113000773 725.317