Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3914g00021 ATGTTGCGTTACACCAGCAAATCCTTCAAGTTCGATGGCTTAATCGGCGAAGATGGCTGCGACTGGGCTCTTAACAAGACGGAAATCTCTGACCAGAGCATTTTCAATCAAACAGTGTGGGTTCTTTTGGGCAATGTGACGGCAAAAGCTGCGAAGTCAAACTTGCCGGATAAGAAATTTGCCACCCACGAAGTTCCAGTCTCGGCCAAGCAGAAGCTGTACGGGTTAGCACAGTGCACGCCGGACTTGACGACGGCAGAATGTAGCCAGTGTTTTGAAACGGCCTTACGACAGCTTGAGGATTGTGATGAAGATACGAGGAAGCTTCAGGAATATTTACCAGATGTTCATCCCTCGCCTCCGCTTGTTCCTCTTGCACCTTCAGGAAAACGACATGCTGGAGCACAAATTATTGCAGTGATTATTGTTGCTGTCATTGTTATTTCAGTGACGCTTTTTTGTTCGATGAGCTGCTATTTGCTAACGAGAAAACTACGGAGGAGCCAGCAATCTATTCTTACACAAAACTTTGGCAAAGAAAGTTCAAAGCTGAAGTCCTTGCGATTTAATCTTGCCACAATTAAAGCTGCAACGAATAACTTTTCTCCCCAGAACAGAATTGGTAAAGGTGGGTTTGGACATGTACACAAGGGAATTCTTCGTGATGGCCAAGAAATTGCGGTTAAAAGACTCTCCAAAAATTCTAAGCAAGGAGCATTAGAATTTAAGAATGAAGTTTTACTGATAGGCAAACTCCAACACAGAAATCTAGTGACTTCATTGGTGTTTTGCTTGGAAGAACAAGAGAAAATTCTTGTTTACGAGTATGTTCCTAATAAGATTGGAGAAGAAAGTTCCAGCTTGAAATCCATGCGATTTAGTTTGTCTGCAGCTGAAGCTGCAACGAATAAGTTTTCTCAGGCCAATAAAATAGGAAAGGGAGGATTTGGAGAAGTTTACAAGGGTATTCTTCCTAATGGGCAAGAAGTTGCACTCAAGAGACTCTCTAAGGGTTCTCAACAAGGTGCACTAGAATTCAAAAATGAAGTTTTACTAATATCCAAACTTCAGCACAGGAATTTAGTGGCTTTGATTGGATTTTGCTTGGAAAATCAAGAGAAGATACTTATCTATGAATATGTGCCCAACAAGAGCATCGATTGCTTTCTATTCGGTTCACAACAAGAGCAAAAAATGTCAACTTGGTTTGAACGGTGCAAAATTATTAGAGGAATTGCCCAAGGACTTTCATATTTACATGAACATTCACGATTCAAAATTATCCATCGTGACTTGAAACTCAGTAATATTTTATTTGATAACAATATGAATCCCAAGATATCAGATTTTGGCATAGCAAAGATGTATGCTAATGCTATCGATCAAAACGAAGAAAGTACGAGTAAGATTGTGGGAACACATGGCTATATGGCTCCTGAATATGTAATGTATGGAAAATTTTCGGAAAAATCAGATATTTTCAGTTTTGGTGTTATAATTCTGGAGATAATTAGTGGCAGGAGAAACGGCAGCTCCAATGAACCACACCTCTTAAGTCATGCTTGGAAACAATGGCAGAATGGGACACCACTTGAAATATTGGACCCATATCTGATGAGAGGATCTTATTCAGAAAATGAAATCATAAAATGTCTGCAGATTGGGTTATTATGTGTTCAAGCTGATCCAAATGATAGACCTACGATGTCTAACGTTGTTTTCCATCTGAGCAATCTGTGGATTGAATTGCAAAATCCAAGAGAACCTGCCTTCTTTACTCCTGGAAGTGGAATAAGAGAGGTCTTCTACGAATGA 1815 0.3989 MLRYTSKSFKFDGLIGEDGCDWALNKTEISDQSIFNQTVWVLLGNVTAKAAKSNLPDKKFATHEVPVSAKQKLYGLAQCTPDLTTAECSQCFETALRQLEDCDEDTRKLQEYLPDVHPSPPLVPLAPSGKRHAGAQIIAVIIVAVIVISVTLFCSMSCYLLTRKLRRSQQSILTQNFGKESSKLKSLRFNLATIKAATNNFSPQNRIGKGGFGHVHKGILRDGQEIAVKRLSKNSKQGALEFKNEVLLIGKLQHRNLVTSLVFCLEEQEKILVYEYVPNKIGEESSSLKSMRFSLSAAEAATNKFSQANKIGKGGFGEVYKGILPNGQEVALKRLSKGSQQGALEFKNEVLLISKLQHRNLVALIGFCLENQEKILIYEYVPNKSIDCFLFGSQQEQKMSTWFERCKIIRGIAQGLSYLHEHSRFKIIHRDLKLSNILFDNNMNPKISDFGIAKMYANAIDQNEESTSKIVGTHGYMAPEYVMYGKFSEKSDIFSFGVIILEIISGRRNGSSNEPHLLSHAWKQWQNGTPLEILDPYLMRGSYSENEIIKCLQIGLLCVQADPNDRPTMSNVVFHLSNLWIELQNPREPAFFTPGSGIREVFYE 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3914g00021 604 SMART serkin_6 305 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00021 604 ProSiteProfiles Gnk2-homologous domain profile. 17 125 IPR002902 -
Pral3914g00021 604 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 277 380 - -
Pral3914g00021 604 Pfam Protein tyrosine and serine/threonine kinase 204 279 IPR001245 GO:0004672|GO:0006468
Pral3914g00021 604 Pfam Protein kinase domain 306 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00021 604 SUPERFAMILY Protein kinase-like (PK-like) 286 576 IPR011009 -
Pral3914g00021 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Pral3914g00021 604 ProSiteProfiles Protein kinase domain profile. 305 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00021 604 Gene3D Phosphorylase Kinase; domain 1 279 380 - -
Pral3914g00021 604 Gene3D Phosphorylase Kinase; domain 1 161 276 - -
Pral3914g00021 604 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Pral3914g00021 604 Gene3D - 20 114 IPR038408 -
Pral3914g00021 604 Gene3D Transferase(Phosphotransferase) domain 1 381 588 - -
Pral3914g00021 604 Pfam Salt stress response/antifungal 27 104 IPR002902 -
Pral3914g00021 604 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 162 276 - -
Pral3914g00021 604 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 287 594 - -
Pral3914g00021 604 SUPERFAMILY Protein kinase-like (PK-like) 180 279 IPR011009 -
Pral3914g00021 604 CDD STKc_IRAK 311 579 - -
Pral3914g00021 604 FunFam cysteine-rich receptor-like protein kinase 10 381 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3914g00021 Pral-Chr3914 212976 221502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3914g00021 263 592 Receptor kinase-like Gene Family AT3G45860 52.212 3.83e-117 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3914g00021 Pkinase 4.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3914g00021 - - pcin:129293778 417.542