Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3914g00020 ATGTTTCCAGCGCTAATGCTTAGCTTTGGCGCCGAACAGGTTACAGCTTTCCAGTTCATTGAATCAGACTGTTACCCTCTTACTGATAACAAACCTAACCATACGTATGAAGCTAATGTGAAAGCCCTCCTCTCCGACCTCAGCTCCAATTCCACCCAAGACAATGGCTTCTACAATTCACTTGCTGGTTGGGGAACCACAAATCCTATAAGGGGACAAGCTCTTTGCCGTGGGGACGTCACTCCCTCCACATGTCAACACTGTGTCTCACTCGCAGCCCAAAAAACTTTAACCTCTAGCCTTAACTGTACTGAATTCATAATCTACTACGACCTTTGCATGTTGCGTTACAACAGCAAATCCTTCAAGTTCGATGACATAGTCGATGATGGCCTCGCTTGGTCTGGTAACAAGACGGAAATCTCTGACGAGAGCCGTTTCAATCAAACAGTATGGGTTCTTTTAAGGATTGTGACCGCAAAAGCTGCGAATTCAAACTTTCCTGATAAGAAATTTGCCACCTACGAAGTTCCAGTCACGGCCACGCAGAAGCTGTACGGCTTAGCACAGTGCACGCCTGATTTGACAGTTTCAGATTGTGGCCAGTGTTTTCAAACGGCCTTACGACAGTTTCAGGAGTTTTGCGTCGTTCAAGATGAAAGTAAGGGTGTGGAATTTTGTGCGGAGATCCCACGGGTAATGGTTTTTCTGGCCGGATGTAACGTTAGATATGATACGCACCGCTTTTATAATGTAAGCAACGTATCAAATGTACCAGCAGCCGTTCGTCTTGCAACTTCAGGAAAACGACATGCTGGATCACGAATTATTGTTGTGATCGTTGCCTCCACTATCATTTCACCCACGCTTTTTTGTTTGAGCTGCTATTTGCTCAGGAGAAAGCTGAGAAAGAGCCGGCAAACTATTCTCACACAAAACTTTGGCGAAGAAAGTTCGAAGCTGAAGTCCTTGCGATTTAATCTCACTACAATTGAAGCTGCAACGAATAAGTTTTCTCTCCAGAATAGAATTGGCAAAGGTGGATTTGGATATGTATACAAGGGAGTTCTTCATGATGGCCAAGAAATTGCTGTGAAAAGACTCTCAAAAAATTCTCTGCAAGGAGCATTAGAATTTAAGAATGAAGTTTTGCTGATAGCCAAACTCCAACACAGAAATCTAGTCACCTTGTTGGGGTTTTGCTTGGAAAAACAAGAGAAAATTCTTATTTACGAATATGTTCCTAATAAGAGTATTGATTTCTTTTTATTTGATTCTAAAAATCAAAGGCAATTAAATTGGCTGGAACGATTCAACATTATTGGTGGAATTGCTCGTGGACTTCTTTACCTACATGAACATTCTCGTTTCAAAGTTATTCACCGTGATCTTAAACCAAGTAATGTTTTATTAGATAGTAAGATGAATCCAAAGATATCAGATTTTGGTATGGCAAGAATGGTTGCAATAGATCAAGATCAAGAGAATACAAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATTTAATGTACGGACAATTTTCAGAGAAATCAGATATATTTAGTTTTGGAGTTATAATCTTAGAGATAATTAGCAGCAGAAGGAATGCTAGATCTTATGAATCACATCTCTTGACTCATGCTTGGAAGCAATGGAAGGAGGGAACACCATTACACGTATTGGACTCATGTCTAATGGAATCTTGTTCTCAAAGTGAAGTAGTAAGATGCGTGCAAATTGGGTTATTATGTGTTCAAGAAAATCCAGAAGATAGGCCAACAATGTCTCAAACTGTTTCATATCTTAGTAATCCTTCCGTTGAATTGCCCTCTCCAAGAGAACCAGCATTCTTCATGCACAGCCGACAAAATTCAAGTGAAAATATTGCAACAGAATCACTTTTGAATCGATCTTCTGTGAATCCTAATCGGTTCTCTTTGAATGAAATGTCTCAGACTGAACTCTTCGCACGATGA 1986 0.4018 MFPALMLSFGAEQVTAFQFIESDCYPLTDNKPNHTYEANVKALLSDLSSNSTQDNGFYNSLAGWGTTNPIRGQALCRGDVTPSTCQHCVSLAAQKTLTSSLNCTEFIIYYDLCMLRYNSKSFKFDDIVDDGLAWSGNKTEISDESRFNQTVWVLLRIVTAKAANSNFPDKKFATYEVPVTATQKLYGLAQCTPDLTVSDCGQCFQTALRQFQEFCVVQDESKGVEFCAEIPRVMVFLAGCNVRYDTHRFYNVSNVSNVPAAVRLATSGKRHAGSRIIVVIVASTIISPTLFCLSCYLLRRKLRKSRQTILTQNFGEESSKLKSLRFNLTTIEAATNKFSLQNRIGKGGFGYVYKGVLHDGQEIAVKRLSKNSLQGALEFKNEVLLIAKLQHRNLVTLLGFCLEKQEKILIYEYVPNKSIDFFLFDSKNQRQLNWLERFNIIGGIARGLLYLHEHSRFKVIHRDLKPSNVLLDSKMNPKISDFGMARMVAIDQDQENTNRIVGTYGYMSPEYLMYGQFSEKSDIFSFGVIILEIISSRRNARSYESHLLTHAWKQWKEGTPLHVLDSCLMESCSQSEVVRCVQIGLLCVQENPEDRPTMSQTVSYLSNPSVELPSPREPAFFMHSRQNSSENIATESLLNRSSVNPNRFSLNEMSQTELFAR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3914g00020 661 Gene3D - 132 249 IPR038408 -
Pral3914g00020 661 Gene3D - 18 122 IPR038408 -
Pral3914g00020 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 657 - -
Pral3914g00020 661 Gene3D Phosphorylase Kinase; domain 1 299 413 - -
Pral3914g00020 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pral3914g00020 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 299 413 - -
Pral3914g00020 661 CDD STKc_IRAK 344 605 - -
Pral3914g00020 661 ProSiteProfiles Protein kinase domain profile. 338 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00020 661 Pfam Salt stress response/antifungal 140 246 IPR002902 -
Pral3914g00020 661 Pfam Salt stress response/antifungal 29 119 IPR002902 -
Pral3914g00020 661 SUPERFAMILY Protein kinase-like (PK-like) 322 629 IPR011009 -
Pral3914g00020 661 SMART serkin_6 338 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00020 661 Pfam Protein tyrosine and serine/threonine kinase 339 604 IPR001245 GO:0004672|GO:0006468
Pral3914g00020 661 FunFam cysteine-rich receptor-like protein kinase 10 414 612 - -
Pral3914g00020 661 ProSiteProfiles Gnk2-homologous domain profile. 129 249 IPR002902 -
Pral3914g00020 661 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Pral3914g00020 661 ProSiteProfiles Gnk2-homologous domain profile. 18 122 IPR002902 -
Pral3914g00020 661 Gene3D Transferase(Phosphotransferase) domain 1 414 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3914g00020 Pral-Chr3914 161256 163974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3914g00020 19 624 Receptor kinase-like Gene Family AT4G23230 42.720 2.07e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3914g00020 PK_Tyr_Ser-Thr 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3914g00020 - - cam:101500396 632.869