Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3914g00017 ATGTATACTGACCCAGTTGGAGAAGAAGGTTCAAATCTGAGATCCTTGCAATTTAGCTTGGCTACAGTTGAAGCTGCAACAGATAAGTTTTCCGAAGAGAACAAAATAGGGAAAGGAGGATTTGGAGAAGTTTACAAGGGCACTCTTCTTGATGGACGAGAAATTGCTGTCAAGAGACTCTCAAGAAGATCAATGCAAGGAACATTAGAATTCAAAAATGAAATTTTGCTTATAGCCAAACTCCAACATAGAAATTTGGTGACGTTATTGGGATTCTGCTTGGAAGAACAAGAGAAAATTCTTGTTTATGAATTTGTGCCTAACAAAAGCATTGATTTCTTCTTATTTGATTCTGAAAAACAAAGATTATTCAATTGGTTTGAGCGATTCAAAATTATCGGAGGAATTGCACAAGGACTTTCTTACTTACATGAACATTCTCGCCTAAAAGTCATCCATCATGACTTCAAACCAAGCAATATTTTATTAGATAACAAGATGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATGATTTCTATAGATGAAGATCAAAGAAACACAAATAGAATTGTCGGGACATATGGTTATATGGCTCCTGAATACATAATGAATGGACAATTTTCTGAAAAGTCTGATGTATTTAGTTTTAGAGTTATAGTTTTAGAAGTGCTTAGTGGAAAGAGGAATGCTAGATCATATGAATCACACCTCTTAACATATGTCTGGAAGAAGTGGGACGAGGGATCACCATTGCAAATATTGGACCCTTTTCTGATGGAATCATGTTCTGAAATTGAAGCAATAAAATGTGTGCAAATTGGGTTATTGTGCGTTCAACCAAATCCAGAAGAAAGGCCAACAATGTCTCAAATTGTTTCATATCTTAGTAATCTTTCCATTGACTTACCATCTCCAAGAGAACCTGCGTTCTTCGTGCGTCCCAATCCAACTATAGTTCCAGAATGGGGTTTGGATCAAACTCTTCAGAGTTATTCAACCTCCAATTCAGCTACTGGTTCAAATGAATCGTCTCAGCTCTTACCTCGATGA 1056 0.3617 MYTDPVGEEGSNLRSLQFSLATVEAATDKFSEENKIGKGGFGEVYKGTLLDGREIAVKRLSRRSMQGTLEFKNEILLIAKLQHRNLVTLLGFCLEEQEKILVYEFVPNKSIDFFLFDSEKQRLFNWFERFKIIGGIAQGLSYLHEHSRLKVIHHDFKPSNILLDNKMNPKISDFGMARMISIDEDQRNTNRIVGTYGYMAPEYIMNGQFSEKSDVFSFRVIVLEVLSGKRNARSYESHLLTYVWKKWDEGSPLQILDPFLMESCSEIEAIKCVQIGLLCVQPNPEERPTMSQIVSYLSNLSIDLPSPREPAFFVRPNPTIVPEWGLDQTLQSYSTSNSATGSNESSQLLPR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3914g00017 351 CDD STKc_IRAK 36 300 - -
Pral3914g00017 351 Pfam Protein kinase domain 31 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00017 351 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 2 105 - -
Pral3914g00017 351 FunFam cysteine-rich receptor-like protein kinase 10 106 304 - -
Pral3914g00017 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Pral3914g00017 351 ProSiteProfiles Protein kinase domain profile. 30 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00017 351 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 342 - -
Pral3914g00017 351 SUPERFAMILY Protein kinase-like (PK-like) 15 327 IPR011009 -
Pral3914g00017 351 Gene3D Transferase(Phosphotransferase) domain 1 106 305 - -
Pral3914g00017 351 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Pral3914g00017 351 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3914g00017 Pral-Chr3914 130834 132644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3914g00017 14 322 Receptor kinase-like Gene Family AT4G11480 57.962 7.45e-132 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3914g00017 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3914g00017 - - pcin:129293778 523.472