Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3914g00014 ATGGATCCTCATAGCTTTGGGCAGAGAGGTGAAACTGTGTTCCAAAATCACCAGAATTTTCGGGGAAGAAATGACAAGATAGCTGAGGATTTGCCTTATTTTGATCTTGAAACTCTGTGTGTTGCTACCAAAAACTTTTCTGATTCAAATAAGCTTGGTCAAGGCGGCTTTGGCCCTGTTTACAAGGGCGTATTAAGTGATGGCCAGGAAGTAGCAATCAAGAGGCTTTCAACGGGCTCTGAACAGGGCTCAGATGAATTCATAAACGAGGTTCTGCTCATACTGAAACTCCAGCACAAAAATCTAGTGAGGCTTCTAGGATTTTGTTTAGATGGAGAAGAAATGCTTCTTGTTTATGAGTTTCTGCCTAATGGCGGCCTTGATGCAGTCCTTTTCGATCCAAGGCAACGAGCACGACTAAGTTGGATCAAACGTATTGATATAATAAGTGGAATAGCAAGAGGGATTCTTTATCTTCATGAAGATTCTCGATTAAAGATAATTCATAGAGATCTAAAAGCAAGTAATATATTATTAGACCGCGAAATGAACCCAAAAATATCAGATTTTGGAATGGCAAGAATATTTGCAGGAGCTGAAGGTGAAGCTAATACTGCTACTATAGTTGGCACATATGGATACATGGCTCCCGAATATGCTATGGAGGGAATATATTCTATAAAATCTGATGTCTTCGGTTTTGGAGTGTTATTGCTTGAAATTATCACCGGGAGGCGTAACGCAGGTTTCTATCACTCTAAACATGCTCCTAGCCTTTTGGCATATGCATGGCATCTATGGAATGAGGGAAGCGCACTGGAGTTGATGGACCCTCTACTAGCTGATTCATACCCTGAAGATCAGTTTCTAGTATACGTGCATGTTGGATTACTGTGTGTTCAAGAAGATGCGTATGACAGACCAACCATGTCTTCGGTTGTTTTAATGTTGAAAAGCCAATCACCAACTCTTGGTCAACCCAAAAAGCCACCCTTCTGTGTGGGAAGAATCATTGATAATGATCATCACGTGCCAGAAAATGAACATTGCTCTGTCAATAACTTGACAATCTCTGATATACTGCCCCAGTGA 1092 0.4093 MDPHSFGQRGETVFQNHQNFRGRNDKIAEDLPYFDLETLCVATKNFSDSNKLGQGGFGPVYKGVLSDGQEVAIKRLSTGSEQGSDEFINEVLLILKLQHKNLVRLLGFCLDGEEMLLVYEFLPNGGLDAVLFDPRQRARLSWIKRIDIISGIARGILYLHEDSRLKIIHRDLKASNILLDREMNPKISDFGMARIFAGAEGEANTATIVGTYGYMAPEYAMEGIYSIKSDVFGFGVLLLEIITGRRNAGFYHSKHAPSLLAYAWHLWNEGSALELMDPLLADSYPEDQFLVYVHVGLLCVQEDAYDRPTMSSVVLMLKSQSPTLGQPKKPPFCVGRIIDNDHHVPENEHCSVNNLTISDILPQ 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3914g00014 363 SMART serkin_6 46 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00014 363 Pfam Protein tyrosine and serine/threonine kinase 49 314 IPR001245 GO:0004672|GO:0006468
Pral3914g00014 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pral3914g00014 363 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 358 - -
Pral3914g00014 363 Pfam Domain of unknown function (DUF3403) 323 362 IPR021820 GO:0004674
Pral3914g00014 363 FunFam Cysteine-rich receptor-like protein kinase 10 17 121 - -
Pral3914g00014 363 Gene3D Phosphorylase Kinase; domain 1 9 121 - -
Pral3914g00014 363 Gene3D Transferase(Phosphotransferase) domain 1 122 327 - -
Pral3914g00014 363 SUPERFAMILY Protein kinase-like (PK-like) 30 345 IPR011009 -
Pral3914g00014 363 CDD STKc_IRAK 52 318 - -
Pral3914g00014 363 ProSiteProfiles Protein kinase domain profile. 46 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3914g00014 363 FunFam Liguleless narrow1 122 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3914g00014 Pral-Chr3914 119377 121059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3914g00014 34 363 Receptor kinase-like Gene Family AT4G11530 55.193 4.73e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3914g00014 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3914g00014 - - pcin:129293128 663.685