Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3910g00001 ATGGCTCGATCTCTGTTAATATTATTCTTAAGTTTCTTTCTCTTTGCTTGTCTTCTTCCAACAGCCACATCAAGATTAAGAAGATCCAAACAGTCTCTATCTCAGAACATCCAATGGTGGTGCGATCGAACCCCACACCCAGAACAGTGCGAATTCTACATGATGAGCCGTACCCACCGCCATGGCCACAGGCTGAAACACAAGTCCAAGTTCAGAGTCAATCTGATTCAGTTAGCTCTGGATCAAGCCAAACACATGCAATATGAAACTCGTGAAAATGCCCAGAATTGCGAAGCAGAGAAGCTTAAAGTTGTGTTGGATGATTGCTTGAAGCTTTACGATAATGCCATCTTCCATTTGAACCGAACCTTCCAAGGGCTCGGATCAAAACGTGGTCGTCGTCCGGGTTGCTCCAATTTGGATGCTCAAACATGGCTCAGTACAGCTCTCACTAACATTCAAACATGCAAGAACGGAGCTAAGGATTTAAAGCTCACAGTGCCACAATTTACAGAGTCCAATACTGTGTGTTACAATGTGTCGAAGATGATAAGCAATAGTTTGGCTATAAACGCGGCGTTCCTGACAAGATCAGAGAGAGAAGAACTCAAGAATGGGAATAATAATGGTGGGTTTGGGCAGGATGATGATGAGAAGAATGGGTTTCCGAGGTGGTTTTCGAGGAAGGAGAGGAAGTTGGTGACGGTGTCTGCGTCCAAGATAAAGGCGAATCTGGTGGTGGCGAAGGATGGCTCCGGGCATTTCAGGACGGTGCAGGCGGCGATAAATGCGGCGGCGAAGAGGAAGTACAAGACGAGGTTTGTGATAAGAGTAAAGAAAGGGGTATATAATGAGAATATTGAAGTCGATAAGAGTAACGATAATATAATGCTGATTGGTGATGGATTGAGAGATACTGTGATCACAAGTTCTAAGAGTACTTCGGATGGCCTTACTACCTATAGCACTGCCACTGCTGGCATAGATGGGCTTCACTTCATTGCCCGTGATATATCATTCAGGAACAGTGCTGGTCCTCGCAAGGGACAAGCAGTGGCACTCCGATCAGCCTCCGATCTCTCTGTCTTCTATAGATGTGGCATTATAGGTTATCAAGACACTGTCATGGCTCATGCACAACGTCAATTTTACAAACAATGCTACATTTTTGGAACTGTTGATATCGTCTTCGGCAACGCCGCCGCAGTTTTCCAAAACTGCATAATTCTCGTAAGGAGGCCATTATCGGGCCAGGCCAATATGATCACGGCCCAAGGTCGAGGGGACCCGTTCCAAAACACCGGCACCTCAATACACAGTTGCGTAATCAAAGCCGCGCCAGACCTCAAGCCTGTCATCAGGTCGGTCTCGACCTACCTGGGCCGGCCCTGGCAAGAATACGCTAGAGTTGTGGTAATGAGGTCCCGCATAGACTCCTTGGTAAGCCCTTTGGGCTGGTCCAAATGGGGAAATACTAATTTTGCTCTGAATACATTGTACTTTGGAGAATATAAAAACTTTGGGTCTGGTTCATCCACAAAGAATAGAGTAAAATGGAAAGGATATCATGTGATAGCTAGCTCAGCCGAAGCATCAAAGTTCACTGTGAATGGCCTCATTGCTGGTGGTACATGGTTGCCTTCAACTGGAGTTCCGTTTACTTCTGGTTTATAG 1674 0.4606 MARSLLILFLSFFLFACLLPTATSRLRRSKQSLSQNIQWWCDRTPHPEQCEFYMMSRTHRHGHRLKHKSKFRVNLIQLALDQAKHMQYETRENAQNCEAEKLKVVLDDCLKLYDNAIFHLNRTFQGLGSKRGRRPGCSNLDAQTWLSTALTNIQTCKNGAKDLKLTVPQFTESNTVCYNVSKMISNSLAINAAFLTRSEREELKNGNNNGGFGQDDDEKNGFPRWFSRKERKLVTVSASKIKANLVVAKDGSGHFRTVQAAINAAAKRKYKTRFVIRVKKGVYNENIEVDKSNDNIMLIGDGLRDTVITSSKSTSDGLTTYSTATAGIDGLHFIARDISFRNSAGPRKGQAVALRSASDLSVFYRCGIIGYQDTVMAHAQRQFYKQCYIFGTVDIVFGNAAAVFQNCIILVRRPLSGQANMITAQGRGDPFQNTGTSIHSCVIKAAPDLKPVIRSVSTYLGRPWQEYARVVVMRSRIDSLVSPLGWSKWGNTNFALNTLYFGEYKNFGSGSSTKNRVKWKGYHVIASSAEASKFTVNGLIAGGTWLPSTGVPFTSGL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3910g00001 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 194 IPR035513 -
Pral3910g00001 557 Pfam Pectinesterase 244 542 IPR000070 GO:0030599|GO:0042545
Pral3910g00001 557 CDD PMEI-like_3 39 196 - -
Pral3910g00001 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 194 IPR035513 -
Pral3910g00001 557 Pfam Plant invertase/pectin methylesterase inhibitor 36 190 IPR006501 GO:0004857
Pral3910g00001 557 PANTHER PECTINESTERASE 13 547 - -
Pral3910g00001 557 SUPERFAMILY Pectin lyase-like 240 556 IPR011050 -
Pral3910g00001 557 Gene3D - 237 557 IPR012334 -
Pral3910g00001 557 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Pral3910g00001 557 NCBIfam pectinesterase inhibitor domain 5 191 IPR006501 GO:0004857
Pral3910g00001 557 SMART PMEI_2 32 190 IPR006501 GO:0004857
Pral3910g00001 557 FunFam Pectinesterase 238 557 - -
Pral3910g00001 557 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3910g00001 Pral-Chr3910 12335 15406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3910g00001 34 557 Carbohydrate Esterase AT5G51500 55.408 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3910g00001 K01051 - gmx:100807908 670.233