Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3907g00002 ATGGCACTCAATGATCAAGAAGTTGGATATTCTTCAAGCTATTGCCGTTCAAATAGAAGACACAAGTATGATGTGTTTTTAAGTTTTCGAGGAGAAGACACCCGTAAGAATTTTGCAGACCACTTATATGCTGCTTTGTGTCACAATGGACTGATAACCTTTAGAGATGAGGAAGAACTTGGGAGGGGAGAAATTATCAAACCAAGTTTGCTTCAAGCAATTGAAGAATCTTTGTCAGCAATTATTGTTCTCTCTGAAAACTATGCTACATCCACATGGTGCTTAGATGAACTCCTAAAGATCCTTCATTGTAAGAAAGAGTTAGGCCTTCATATATTTCCAATCTTTTATGGCATAGATCCGTCTGATGTTCGGCATCAAAAAGGAAGTTTTGCAAAAGCCTTTGAAAAGCTTGAACAGAAATTTGCACATGACAAAGTGAAGGTACAAAGATGGAGGGATGCCTTGAGAGAAGTTGCTGACTTGGCTGGATGGAGCTCTGAAAATTGGTATGAAACGAAACTCATTGAAATAGTTACTGAAAATGTGAGGTCAAGAATAGTTGATCACCCACAATTCGATTCAAATGATGAAGGTGTTGATGATGGACTTGTTGGAATTGATGAGAAAATAGCAGATTTTGATTCATTTCTAGCGAATAAATCGGAGGAAGTTCAATTTCTAGGAATATGGGGAATGGGAGGGTTAGGCAAAACTACTCTTGCTAGAATTGTTTATGAGAGAATACACAGAAACTATGAAGTTCATTTATTTCTTCATAATGTTAGAGAGGAATCTGTAAAAGATGGTGGTTTAATTTCACTGCAACAAAAACTTCTTTCCCGTTTGAAAAAATCAATCAGAATGGAAGTGTGTGACTGTTATGATGGAAGAAAGCTGATAAGAAGAATGTTATGCAGTAAAAAAGTTCTACTTGTCCTTGATGATGTGAGTGACATAAGCCAACTTGAGAATTTGGCTGGAAAGGAAGGATGGTTTGGCAAAGGGAGCAGAATAATAATAACAACTAGAGATCAACATGTGTTATTGTTGCATGGTGTAGTTTCTCAGTATGAAATGAATTTCTTAAGTCACGATGAATCCCTTCAACTTTTTATTCAAATAGCTTTCAAAGGAGATCAGCCAAATGAAGATTATTTGGAGCTTTCTAGAAGGGCGATTAATTCTGCTCAAAACCTTCCTTTGGCAATCAAAGTGCTTGGTTCATTTCTTTGTGGAAGAAGCATACCAGAATGGGAGAATGCACTCAAGAAGATTCCTTTAGATGGCCTTTTTGATATACTTAAAGTGAGCTTTGATGGACTGCGAGATAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGCTTGCGCAAGGATGATGTCATACAGATTTTAGAAAATAGTGGTCTTCACCCAATAATCGGAATAAGAACTCTTATTCAGAAATCATTGGTAACTGAAGCTAAAGGGCGCTTGAGGGTGCATGATAGGCTTCAAGAAATGGGCAAGGAAATTGTTTTTCGCGAATCAACCAATGATGCTGGCAATCGTAGTAGGATATGGTCCTTGGAGGATGCTAGTCTTGTGCTTAGAAATATGAGGGGAACTGAAGCAATACGTGGTATAGTGGTACAATTTGACAAACCAGATGTCATATATTTGGAACCTAAAGCCTTCTCAAATATGAGTAATCTCAAGTTACTTATCATATCACATTCTTCACATGACCAATTGAATCTTCTTCATGGACTTAACTGTCTCCCCAATTCACTGAAAGTCATAGATTGGAAGGAGTATCCTTTAGATTCCCTTCCAGGTCAAACTCAATTTGATGAACTTGTTGATCTCAAAATGCAACACAGCAAATTAAAGGAACTTTGGAGGGGAGATCAGTTTCCACAAAGTCTAAAGTTCATTGATTTGAGTCATTCAACAAACCTGATGAGAACATCAAACTTTGATAGAACTCCTAATCTTCAAAGATTAATTCTTAAGGGGTGTACAAAGCTTGTTGAAGTTCACTGCTCTTTCGGGCAACACAAGAATCTTGTCATTGTTAATTTTAAAGGTTGTAAAAGTATTAAAAACCTTCCAACCAAATTGGAGATGAATTGCTTAGAGACATTTATTCTCTCTGGTTGTTCAAAAGTTAAGAGGCTTCCTGAGTTTGGAAAAGGTATGACATGTTTATCAAAGCTTAATCTAAAAGGGACTGCTATATCCAAACTACCTCAATCATTGGTCAATTTGACTGGTCTTGTTATATTGAATTTAAAGTATTGCAAAAGCCTGGTATGTCTTCCAAGTGATTTTAAAAAATTGAAAGCTATAAAGAAGATCAATATTCGTGGCTGCTCAAAGTTGTCAAGGCTTCCAGAGAATTTGAATGAAAATGAGGCATTGGAGGAGCTTGATGTGGGTGGGACTGCTCTAAAAGAAGTGCCTTCGTCCCTCAATAATTTGAAAGTATTATCTCTTAGTGCATGCAATTCTTCTGCACAATCATCCTCATGGAATCACTACTCTCTTCTCAAGCGGGCATTTAGACTTCAAAGGCCTTCAAGTTCAACTAAGTTTTTGTGGTCTCCATCTTTTTCAAATCTATCATCTTTGGTCGAGTTACATTTAAATGGTTGCAATCTTGATGATGAATCACTATCCAGTGAAATAGGCAATTTATCATCATTGACAGCATTAGGTTTGGCTGGAAATAATTTTGTTGAAATTCCTTTGAGGTTCATTTCCAAACTTCGAAAGCTTGAATTTATTTATTTGAAGGATTGCCCAAGGCTTCGGTCTTTGCCTCAACTTCCAGCAAACCTGTCAGTGATACATGCTGGTGATTGTCCATTATTGAAAAATTATGTGTGTTCACAGCAACTATGGGAATTCACTGAGGAATTTGAATATCAGACTTCACGCCGATATGAATTCTCATCAGTAGACGGATATAAAGTTTACACTTTCAGTGACATGACGTCTGCATTTGTGAGACGGAACGAGTCACAAGTTGATGACTTCTTCCTGCAACCGACTCGCATATTAACTATTCCTGGTAGTGAAGTGCCATCATGGTTTCACAATCAAAGCTATTTTTGTGCGAAAGATCTCTCATTTGAGGATACTCCAACAAATGTGTCATTCATAGTAAATAAGCCTGATTCATGCTGTTCAAGTGAATGGTGGGGCATAGCTGTATGCCTAGTGCTAGAAAATGATTCGGAACATGCAAACTATGATGATTTTGCCGTACTTGGTTGGACTTATAGAGTTTCTGAAGTGCAGTGTGGGTGGCGCGTGTTGTGTAAAGAAGATGTTGAGAGATGGCGAAACACAAGCAGTGACGAAGGCTGTAGTGTCAGCACTACTGATGATAAGTTCATTGATGAATCTAGATGA 3411 0.3744 MALNDQEVGYSSSYCRSNRRHKYDVFLSFRGEDTRKNFADHLYAALCHNGLITFRDEEELGRGEIIKPSLLQAIEESLSAIIVLSENYATSTWCLDELLKILHCKKELGLHIFPIFYGIDPSDVRHQKGSFAKAFEKLEQKFAHDKVKVQRWRDALREVADLAGWSSENWYETKLIEIVTENVRSRIVDHPQFDSNDEGVDDGLVGIDEKIADFDSFLANKSEEVQFLGIWGMGGLGKTTLARIVYERIHRNYEVHLFLHNVREESVKDGGLISLQQKLLSRLKKSIRMEVCDCYDGRKLIRRMLCSKKVLLVLDDVSDISQLENLAGKEGWFGKGSRIIITTRDQHVLLLHGVVSQYEMNFLSHDESLQLFIQIAFKGDQPNEDYLELSRRAINSAQNLPLAIKVLGSFLCGRSIPEWENALKKIPLDGLFDILKVSFDGLRDNEKNIFLDIACFFNGLRKDDVIQILENSGLHPIIGIRTLIQKSLVTEAKGRLRVHDRLQEMGKEIVFRESTNDAGNRSRIWSLEDASLVLRNMRGTEAIRGIVVQFDKPDVIYLEPKAFSNMSNLKLLIISHSSHDQLNLLHGLNCLPNSLKVIDWKEYPLDSLPGQTQFDELVDLKMQHSKLKELWRGDQFPQSLKFIDLSHSTNLMRTSNFDRTPNLQRLILKGCTKLVEVHCSFGQHKNLVIVNFKGCKSIKNLPTKLEMNCLETFILSGCSKVKRLPEFGKGMTCLSKLNLKGTAISKLPQSLVNLTGLVILNLKYCKSLVCLPSDFKKLKAIKKINIRGCSKLSRLPENLNENEALEELDVGGTALKEVPSSLNNLKVLSLSACNSSAQSSSWNHYSLLKRAFRLQRPSSSTKFLWSPSFSNLSSLVELHLNGCNLDDESLSSEIGNLSSLTALGLAGNNFVEIPLRFISKLRKLEFIYLKDCPRLRSLPQLPANLSVIHAGDCPLLKNYVCSQQLWEFTEEFEYQTSRRYEFSSVDGYKVYTFSDMTSAFVRRNESQVDDFFLQPTRILTIPGSEVPSWFHNQSYFCAKDLSFEDTPTNVSFIVNKPDSCCSSEWWGIAVCLVLENDSEHANYDDFAVLGWTYRVSEVQCGWRVLCKEDVERWRNTSSDEGCSVSTTDDKFIDESR 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3907g00002 1136 Gene3D - 362 443 IPR042197 -
Pral3907g00002 1136 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 726 IPR044974 GO:0006952
Pral3907g00002 1136 Pfam TIR domain 22 183 IPR000157 GO:0007165
Pral3907g00002 1136 Pfam NB-ARC domain 221 426 IPR002182 GO:0043531
Pral3907g00002 1136 PRINTS Disease resistance protein signature 304 318 - -
Pral3907g00002 1136 PRINTS Disease resistance protein signature 227 242 - -
Pral3907g00002 1136 PRINTS Disease resistance protein signature 820 836 - -
Pral3907g00002 1136 PRINTS Disease resistance protein signature 397 411 - -
Pral3907g00002 1136 SUPERFAMILY "Winged helix" DNA-binding domain 431 534 IPR036390 -
Pral3907g00002 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 453 IPR027417 -
Pral3907g00002 1136 Gene3D - 20 192 IPR035897 -
Pral3907g00002 1136 SMART till_3 22 162 IPR000157 GO:0007165
Pral3907g00002 1136 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 165 IPR035897 -
Pral3907g00002 1136 Gene3D - 203 353 IPR027417 -
Pral3907g00002 1136 Gene3D Ribonuclease Inhibitor 728 972 IPR032675 -
Pral3907g00002 1136 Gene3D Ribonuclease Inhibitor 555 727 IPR032675 -
Pral3907g00002 1136 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Pral3907g00002 1136 Pfam Leucine Rich Repeat 617 635 IPR011713 -
Pral3907g00002 1136 SUPERFAMILY L domain-like 556 948 - -
Pral3907g00002 1136 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3907g00002 Pral-Chr3907 55960 60104 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3907g00002 6 828 WRKY Transcription Factor Family AT4G12020 30.321 2.49e-99 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3907g00002 - - pcin:129318967 1115.14