Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3905g00028 ATGGCACTCGATGATCAAGAAGTTGGATATTCTTCAAGCTATTGCCGTTCAAATAGAAGACACAAGTATGATGTGTTTTTAAGCTTTCGAGGAGAAGACACCCGTAAGAATTTTACAGACCACTTATATGCTGCTTTGTGTCACAATGGACTGATAACCTTTAGAGATGAGGAAGAACTTGGGAGGGGAGAAATTATCAAACCAAGTTTGCTTCAAGCAATTGAAGAATCTTTGTCAGCAATTATTGTTCTCTCTGAAAACTATGCTGCATCCACATGGTGCTTAGATGAACTCCTAAAAATCCTTCATTGTAAGAAAGAGTTAGGCCTTCATATATTTCCAATCTTTTATGGCATAGATCCGTCTGATGTTCGGCATCAGAAAGGAAGTTTTGCAACAGCCTTTGAAAAGCTTGAACAGAAATTTGCACATGACAAAGTGAAGGTGCAAAGATGGAGGGATGCCTTGAGAGAAGTTGCTGACTTGGCTGGATGGAGCTCTAAAAATTGGTATGAAACGAAACTCATTGAAATAGTTACTGAAAATGTGAGGTCAAGAATAGTTGATCACCCACAATTCGATTCAAATGATGAAGGTGTTGATGATGGACTTGTTGGAATTGATGAGAAAATAGCAGATTTTGATTCATTTCTAGCAATAAATCGGAGGAAGTTCAATTTAAGCATACCAGAATGGGAGAATGCACTCAAGAAGATTCCTTTAGATGGCCTTTTTGATATACTTAAAGTGAGCTTTGATGGACTGCGATCTAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGCTTGCGCAAGGATGATGTCATACAGATTTTAGAAAATAGTGGTCTTGATCCGGTAATCGGACTAAGAACTCTTATTCAGAAATCATTGGTAACTGAAGCTGAAGGGTGCTTAAGGGTGCATGATAGGCTTCAAGAAATGGGCAAGGAAATTGTTTTTCGCGAATCACCCAATGATGCTGGCAATCGTAGTAGGATATGGTCCTTGGAGGATGCTAGTCTTGTGCTTAGAAATATGAGGGGAACTGAAGCAATACGTGGTATAGTGGTACAATTTGACAAACCAGATGTCATATATTTGGACCCTAAAGCCTTCTCAAATATGAGTAATCTCAAGTTACTTATCATATCACATTCTTCACATGACCAATTGAATCTTCTTCATGGACTCAACTGTCTTTCCAATTCACTGAAAGTCATAGATTGGAAGGAGTATCCTTTAGATTCCCTTCCAGGTCAAACTCAATTTGGTGAACTTGTTGATCTAAAAATGCAACACAGCAAATTAAAGGAACTTTGGAGAGGAGATCAGTTTCCACAAATTCTAAAGTTCATTGATTTGAGTCATTCAACAAACCTGATGAGAACATCAAACTTTGATAGAACTCCTAATCTTCAAAGATTAATTCTTAAGGGGTGTACAAAGCTTGTTGAAGTTCACTGCTCTCTCGGGCAACACAAGAATCTTGTCATTGTTAATTTTAAAGGTTGCAAAAGTATTAAAAACCTTCCAACCAAATTGGAGATGAATTGCTTAGAGACATTTATTCTCTCTGGTTGTTCAAAAGTTAAGAGGCTTCCTGAGTTTGGAAAAGGTATGACATGTTTATCAGAGCTTAATCTAAAAGGGACTGCTATATCCAAACTACCTCAATCATTGGTCAATTTGACTGGCCTTGCTATATTAAATTTAGAGTATTGCAAAAACCTGGTATGTCTTCCAAGTGATTTTAAAAAATTGAAAGCTATAAAGAAGATCAATATTCGTGGTTGCTCAAAGTTGTCAAGGCTTCCAGAGAATTTGAATGAAAATGAGGCATTGGAGGAGCTTGATGCGCGTGGAACTGCTCTAAAAGAAGTGCCTTCGTCCCTCAATAATTTGAAAGTATTATCTCTTAGTGCATGCAATGCTTCTGCACAATCATCCTCATGGAATCACTTCTGCCTTCTCAAGCAGGCATTTAGGCTTCAAAGGCCTTCAAGTTCAACTAAGTTTTTGTGGTCTCCATCTTTTTCAAATCTGTCATCTTTGGTCGAGTTAAATTTAAATTATTGCAATCTTGATAATGAATCACTATTCAGTGAAATAGGCAATTTATCATCATTGACAGCATTATTTTTGGGTGGAAATAATTTTGTTGAAATTCCTTTGAGCCTCATTTCCAAACTTCGAAAGCTTGAATATATTTATTTGAATGATTGCCCGAGGCTTCGGTTTTTGCCTCAGCTTCCAGCAAACCTGTCAGTGATAGATGCTGGTAATTGTCCATCATTGAAAAATTATGTGTGTTCACAGCAACTATGGGAATTCACTGAGGAATTTGAATATCAGACTTCATGCCAATATGAATTCTCATCAGTAGATGGATATAAAGTTTACATTCTCAGTGACATGAGGTCTGCAATTGTGAGTTGGAACGAGTCACAAGTTTTTTCATCACAGGATGACTTCTTCCTGCAACCGACTCGCATATTAACTATTGCTGGTAGTGAAGTGCCATCCTGGTTTCACAATCAAAGCTATTTTTGTGCGAAAGATCTCCCCTATGGGCATCCTCCAACAAATGTGTCATTCATAGTAAATAAGCCTGATTCATGCTGTTCAAGTGAATGGTGGGGCATAGCTGTATGCCTAGTGCTAGAAAATGATTTGGAACATGCGAAGTATGATGCTCGGGCCGCACTTGGTTGGACTTATAGAGTTTCTAAAGGTGAATATCCAAATTCAGGCCGTGCTTATGCCACTTTTGCGCAGTCCAGATTTGGCCCCCAACTATGTATCATTTACATTCGTTTTTCCTCTTTTGTTGTGGAAAAACCACTTCAAATGGTTTTTTTCACACCGTATGAACCAGCATCGTCATCTTTGAAAATAGTACAGTGTGGGTGGCGGGTGTTGTGTAAAGAAGATGTTGAGAGAAGGCGAAACACAAGGAGTGACGAAGGCTGTAGTGTCAGCACTACTGATGATAAGTTCATTGATGAATGTAGATGA 3027 0.3809 MALDDQEVGYSSSYCRSNRRHKYDVFLSFRGEDTRKNFTDHLYAALCHNGLITFRDEEELGRGEIIKPSLLQAIEESLSAIIVLSENYAASTWCLDELLKILHCKKELGLHIFPIFYGIDPSDVRHQKGSFATAFEKLEQKFAHDKVKVQRWRDALREVADLAGWSSKNWYETKLIEIVTENVRSRIVDHPQFDSNDEGVDDGLVGIDEKIADFDSFLAINRRKFNLSIPEWENALKKIPLDGLFDILKVSFDGLRSNEKNIFLDIACFFNGLRKDDVIQILENSGLDPVIGLRTLIQKSLVTEAEGCLRVHDRLQEMGKEIVFRESPNDAGNRSRIWSLEDASLVLRNMRGTEAIRGIVVQFDKPDVIYLDPKAFSNMSNLKLLIISHSSHDQLNLLHGLNCLSNSLKVIDWKEYPLDSLPGQTQFGELVDLKMQHSKLKELWRGDQFPQILKFIDLSHSTNLMRTSNFDRTPNLQRLILKGCTKLVEVHCSLGQHKNLVIVNFKGCKSIKNLPTKLEMNCLETFILSGCSKVKRLPEFGKGMTCLSELNLKGTAISKLPQSLVNLTGLAILNLEYCKNLVCLPSDFKKLKAIKKINIRGCSKLSRLPENLNENEALEELDARGTALKEVPSSLNNLKVLSLSACNASAQSSSWNHFCLLKQAFRLQRPSSSTKFLWSPSFSNLSSLVELNLNYCNLDNESLFSEIGNLSSLTALFLGGNNFVEIPLSLISKLRKLEYIYLNDCPRLRFLPQLPANLSVIDAGNCPSLKNYVCSQQLWEFTEEFEYQTSCQYEFSSVDGYKVYILSDMRSAIVSWNESQVFSSQDDFFLQPTRILTIAGSEVPSWFHNQSYFCAKDLPYGHPPTNVSFIVNKPDSCCSSEWWGIAVCLVLENDLEHAKYDARAALGWTYRVSKGEYPNSGRAYATFAQSRFGPQLCIIYIRFSSFVVEKPLQMVFFTPYEPASSSLKIVQCGWRVLCKEDVERRRNTRSDEGCSVSTTDDKFIDECR 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3905g00028 1008 SMART till_3 22 162 IPR000157 GO:0007165
Pral3905g00028 1008 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 165 IPR035897 -
Pral3905g00028 1008 Gene3D Ribonuclease Inhibitor 361 520 IPR032675 -
Pral3905g00028 1008 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Pral3905g00028 1008 Pfam TIR domain 22 183 IPR000157 GO:0007165
Pral3905g00028 1008 Gene3D Ribonuclease Inhibitor 521 661 IPR032675 -
Pral3905g00028 1008 Pfam Leucine Rich Repeat 430 448 IPR011713 -
Pral3905g00028 1008 Gene3D Ribonuclease Inhibitor 666 852 IPR032675 -
Pral3905g00028 1008 SUPERFAMILY L domain-like 368 760 - -
Pral3905g00028 1008 SUPERFAMILY "Winged helix" DNA-binding domain 244 347 IPR036390 -
Pral3905g00028 1008 Gene3D - 20 192 IPR035897 -
Pral3905g00028 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 230 636 IPR044974 GO:0006952
Pral3905g00028 1008 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3905g00028 Pral-Chr3905 189591 193641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3905g00028 247 641 WRKY Transcription Factor Family AT4G12020 35.437 2.48e-59 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3905g00028 - - pcin:129318967 699.123