Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3905g00027 AAATCAGAGGAAGTTCAATTTGTAGGAATATGGGGAATGGGAGGGTTAGGCAAAACTACTCTTGCTAGAGCTGTTTATGAGAGAATACACAGAAACTATGAAGTTCATTTATTTCTTCATAATGTTAGAGAGGAATCTGTAAAAGATGGTGGTTTAATTTCACTGCAACAAAAACTTCTTTCCCGTTTGAAAAAATCAATCAGAATGGAAGTGTGTGACTGTTATGAAGGAAGAAAGCTGATGAGAAGAATGTTATGCAGTAAAAAAGTTCTACTTGTCCTTGATGATGTGAGTGACATAAGCCAACTTGAGAATTTGGCGGGAAAGGAAGGATGGTTTGGCAAAGGGAGCAGAATAATAATAACAACTAGAGATCAACATGTGTTATTGTTGCATGGTGTAGTTTCTCAGTATGAAATGAATTTCTTAAGTCCCGATGAATCCCTTCAACTTTTTATTCAAACAGCTTTCAAAAGAGATCAGCCAAATGAAGATTATTTGGAGCTTTCTAGAAGGGCGATTAATTCTGCTCAAAACCTTCCTTTGGCAATCAAAGTGCTTGGTTCATTTCTTTGTGGAAGAAGCATACCAGAATGGGAGAATGCACTCAAGAAGATTCCTTTAGATGGCCTTTTTGATATACTTAAAGTGAGCTTTGATGGACTGCGATATAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGCTTGCGCAAGGATGATGTCATACAAATTTTAGAAAATAGTGGTCTTCACCCAATAATCGGAATAAGAACTCTTATTCAGAAATCATTGAAATGGGCAAGGAAATTGTTTTTCCGAATCACCCATGATGCTGGCAATCGTAGTAGGATATGGTCCTTGGAGGATGCTAGTCTTGTGCTTAGAAATATGAGGGGAACTGAAGCAATACGTGGTATAGTGGTACAATTTGACAAACCAGATGTCATATATTTGGACCCTAAAGCCTTCTCAAATATGAGTAATCTCAAGTTACTTATCATATCACATTCTTCACATGACCAATTGAATCTTCTTCATGGACTTAACTGTCTTCCCAATTCACTGAAAGTCATAGATTGGAAGGAGTATCCTTTAGATTCCCTTCCAGGTCAAACTCAATTTGATGAACTTGTTGATCTCAAAATGCAACACAGCAAATTAAAGGAACTTTGGAGGGAGATCAGTTTCCACAAAGTCTAA 1212 0.3663 KSEEVQFVGIWGMGGLGKTTLARAVYERIHRNYEVHLFLHNVREESVKDGGLISLQQKLLSRLKKSIRMEVCDCYEGRKLMRRMLCSKKVLLVLDDVSDISQLENLAGKEGWFGKGSRIIITTRDQHVLLLHGVVSQYEMNFLSPDESLQLFIQTAFKRDQPNEDYLELSRRAINSAQNLPLAIKVLGSFLCGRSIPEWENALKKIPLDGLFDILKVSFDGLRYNEKNIFLDIACFFNGLRKDDVIQILENSGLHPIIGIRTLIQKSLKWARKLFFRITHDAGNRSRIWSLEDASLVLRNMRGTEAIRGIVVQFDKPDVIYLDPKAFSNMSNLKLLIISHSSHDQLNLLHGLNCLPNSLKVIDWKEYPLDSLPGQTQFDELVDLKMQHSKLKELWREISFHKV 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3905g00027 403 SUPERFAMILY "Winged helix" DNA-binding domain 211 298 IPR036390 -
Pral3905g00027 403 Gene3D Ribonuclease Inhibitor 313 402 IPR032675 -
Pral3905g00027 403 Pfam Leucine Rich Repeat 381 397 IPR011713 -
Pral3905g00027 403 Pfam NB-ARC domain 2 206 IPR002182 GO:0043531
Pral3905g00027 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 233 IPR027417 -
Pral3905g00027 403 SUPERFAMILY L domain-like 319 397 - -
Pral3905g00027 403 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 394 IPR044974 GO:0006952
Pral3905g00027 403 PRINTS Disease resistance protein signature 7 22 - -
Pral3905g00027 403 PRINTS Disease resistance protein signature 177 191 - -
Pral3905g00027 403 PRINTS Disease resistance protein signature 328 344 - -
Pral3905g00027 403 PRINTS Disease resistance protein signature 84 98 - -
Pral3905g00027 403 Gene3D - 1 133 IPR027417 -
Pral3905g00027 403 Gene3D - 142 223 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3905g00027 Pral-Chr3905 167047 168516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3905g00027 4 395 WRKY Transcription Factor Family AT5G45050 34.259 3.79e-58 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3905g00027 - - pcin:129317408 410.609