Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3905g00025 ATGGCACTTGATGATCAAGGAGTTGGGTATTCTTCAAGTTGTTCTCGTTCAAATAGGACACACAACTATTACGTGTTTTTAAATTTTCGAGGAGAAGCCACACGTAAGAGTTTTACAGACCACTTATATGCTGCTTTGTGTCACAATGGACTGATAACTTTTAGAGATGAGGAAGAGCTTGGAAGGGGAGAAGTTATCAAACCAAATCCATCTGACGTTCAGCATCAAAAAGGAAGTTTTACAAAAGCCTTTGAAGAGCTTGAACAGAAATTGGCACATGACAAAGTGAAGGTGCAAAGATGGAGGGATGCTTTGAGAGAAGTTGCTGACTTGGCTGGCTGGAGCTCTGAAAATTGGTATGAAACGAAACTCATTGAGATAGTTACTGAAAAGGTAAGGTCAAGAATACATGGTCAACCACCATTCGATTCAAATGATGAAGGTGTTGATGATGGACTTGTTGGAATTAACGAGAAAATCGCAGATTTTGATTCAGTTCTGGCAATACATCAGAGGAAGTTCAATTTATTGGAATATGGGAAACGGGAGGTTTCTCAGTATGAAATGAATTTCTTAAGTCACGATGAATCCCTTCAACTTTTTATTCAAATAGCTTTCAAAGGAGATCAGCCAAATGAAGATTATTTAGAGCTTTCTAGAAGGGCGATTAATTCTGCTCAAAACTTTCCTTTGGCAATCAAAGTGCTTGGTTCATTTCTTTGTGGAAGAAGCATACCAGAATGGGAGAATGCACTCAAGAAGATTCCTTTAGACCGCCTTTTTGATATACTTAAAGTGAGCTTTGATGGACTGCGATCTAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGCTTGCGCAAGGATGATGTCATACAGATTTTAGAAAATAGTGGTCTTGACCCAGTAATAGGAATAAGAATTCTCATTGAGAAATCATTGGTAATTGAAGCTGAAGGGTGCTTGAGGGTGCATGATAGCCTTCAAGAAATGGGCAAGGAAATTGTTTTTCATAAATCACCCAATGATGCTGGCAACCGTAGTAGGATATGGTCCTTGGAGGATGCTAGTCTTGTGCTTAGAAATATGAGGGGAACTGAAGCAATCCGTGGTCAAACTCAATTTGATGAACTTGTTGATCTTAAAATGCAAGACAGCAAATTAAAAGAACTTTTGAGAGGAACTGGTCAGTTTCTACAATGTTTGAAATTCATTGATTTGAGTCATTCAACAAGCCTGATCAGAACACCAAATTTTGATAAAACTCCTAATCTTCGAAGACTAATTCTTAAAGGGTGTACCAAGCTTATTGAAGTTCACCAATCTCTCGGGTGCCACAAGAATCTTGTCATTGTTGATTTTAAAGGTTGCAAAAGTATTAAGAATCTTCCAACCGAATTGGAGATGAATTGTTTAGAGACACTAGTTCTCTCTGGTTGTTCAAAAGTTAAAAGACTTCCTGAATTTGGTGAAGGCATGGAACATTTATCTGAGCTTGATTTAGAGGGGACTGCTATATCTAAACTACCTCAATCATTGGTCAATTTGATTGGTCTTGCTCTATTAGAGGATTGCAAAAATCTGGTTTGCTTTCCCAGAGATTTTCAGAAGTTGGAAGCTATAAAGAAGATCAACATATCTGGTTGCGCAAAGTTTTCAAGGCTTCCAGAGAATTTGAATGAAAATAAGGTATTGGAAGTGCTTGATATGGGTGGTACTGCCATAAAAGAAGTGCCTTCATCCCTCAATAATTTAAAAGTATTATATCTTAGCAGATGCAATGGTTATGCACAATCATCATCATCATCATGGAATCACTATTGCTTCCTTCTCAAGCAGGCATTTAGGCTTCAAAGGCCTTCAACTTCAACAAAGTTTTTGTGGTCTCCTTCTTTTTCAAGTCTATCATCTTTGGTCGAGTTAGATTTAAGTTATTGTAATCCTGATGATGAATCACTATCCATTGAAATCAGCAATTTATCATCATTGAGAATATTAGGTTTGAGTGGAAACAATTTTGTTGATATTCCTTCAGGCCTCATTTCCAAACTTGGAAAGCTTGAATGCATTATTTTCAGTTATTGCCCAAAGCTTCAATCTTTGCCTCAGCTACCAACAAACCTACCAATGATAAAAGCAAATGATTGTCCATCATTGAAACATTGTATATCTCCGCAGCAACTATGGGAATTCATTGAGAATTTTGAATGTCAGGATGACTTCTTCATCCAACCTACTCGCATATTAATTATTTCTGGTAGCGAAGTGCCATCGTGGTTTCACAATCGAAGTTATTTTTGTGCGGAAGATTTCTCAGTTCTCTTTTTTGGGCCAAGAAATGTGTCATTCATTGCAAACAGGCCTGATTCATGCGGCTCAAGTAGTGAATGGTGGGGCATAGCCGTATGCTTAGTGCTAGAAAATGATTTGCATAGTTATGCAAACTGTAATGGTGCTTCTGACATCCTTGCTTGGACTTATAGAGTTTCAGGAAATGAATATCCAGATTCGTACCGTTTCTGTGGCACTTTTAATCAATCCATAAGTCGCCATCAACTATTTATCATCTACATTCGTTTTTCCTGCTCATTTGTTATGGAACAACCACTTCAAATGGTGTTTTCTATACATGAGAAGTCAGTTTTTCAAATAGGACAGTGTGGGTGGCGTGTAGTGTGTAAAGAAGATGTTGAGAGTAGGCGAAACATTAGTGATGAAGGCTGTAGTTTCAGCACTGATGATAAGTTCATTGATGATACTAGATGA 2775 0.3755 MALDDQGVGYSSSCSRSNRTHNYYVFLNFRGEATRKSFTDHLYAALCHNGLITFRDEEELGRGEVIKPNPSDVQHQKGSFTKAFEELEQKLAHDKVKVQRWRDALREVADLAGWSSENWYETKLIEIVTEKVRSRIHGQPPFDSNDEGVDDGLVGINEKIADFDSVLAIHQRKFNLLEYGKREVSQYEMNFLSHDESLQLFIQIAFKGDQPNEDYLELSRRAINSAQNFPLAIKVLGSFLCGRSIPEWENALKKIPLDRLFDILKVSFDGLRSNEKNIFLDIACFFNGLRKDDVIQILENSGLDPVIGIRILIEKSLVIEAEGCLRVHDSLQEMGKEIVFHKSPNDAGNRSRIWSLEDASLVLRNMRGTEAIRGQTQFDELVDLKMQDSKLKELLRGTGQFLQCLKFIDLSHSTSLIRTPNFDKTPNLRRLILKGCTKLIEVHQSLGCHKNLVIVDFKGCKSIKNLPTELEMNCLETLVLSGCSKVKRLPEFGEGMEHLSELDLEGTAISKLPQSLVNLIGLALLEDCKNLVCFPRDFQKLEAIKKINISGCAKFSRLPENLNENKVLEVLDMGGTAIKEVPSSLNNLKVLYLSRCNGYAQSSSSSWNHYCFLLKQAFRLQRPSTSTKFLWSPSFSSLSSLVELDLSYCNPDDESLSIEISNLSSLRILGLSGNNFVDIPSGLISKLGKLECIIFSYCPKLQSLPQLPTNLPMIKANDCPSLKHCISPQQLWEFIENFECQDDFFIQPTRILIISGSEVPSWFHNRSYFCAEDFSVLFFGPRNVSFIANRPDSCGSSSEWWGIAVCLVLENDLHSYANCNGASDILAWTYRVSGNEYPDSYRFCGTFNQSISRHQLFIIYIRFSCSFVMEQPLQMVFSIHEKSVFQIGQCGWRVVCKEDVESRRNISDEGCSFSTDDKFIDDTR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3905g00025 924 Gene3D - 68 139 IPR035897 -
Pral3905g00025 924 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 167 IPR044974 GO:0006952
Pral3905g00025 924 SUPERFAMILY L domain-like 361 730 - -
Pral3905g00025 924 Coils Coil 84 104 - -
Pral3905g00025 924 Gene3D Ribonuclease Inhibitor 619 749 IPR032675 -
Pral3905g00025 924 Pfam TIR domain 22 68 IPR000157 GO:0007165
Pral3905g00025 924 SMART LRR_typ_2 663 686 IPR003591 -
Pral3905g00025 924 SMART LRR_typ_2 496 519 IPR003591 -
Pral3905g00025 924 SUPERFAMILY "Winged helix" DNA-binding domain 259 363 IPR036390 -
Pral3905g00025 924 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 114 IPR035897 -
Pral3905g00025 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 282 IPR027417 -
Pral3905g00025 924 Gene3D Ribonuclease Inhibitor 349 615 IPR032675 -
Pral3905g00025 924 Gene3D - 15 67 IPR035897 -
Pral3905g00025 924 Gene3D - 191 272 IPR042197 -
Pral3905g00025 924 Pfam NB-ARC domain 180 256 IPR002182 GO:0043531
Pral3905g00025 924 SMART till_3 22 111 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3905g00025 Pral-Chr3905 132165 136233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3905g00025 187 596 WRKY Transcription Factor Family AT5G45050 27.938 1.55e-38 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3905g00025 - - pcin:129317383 857.825