Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3905g00007 ATGGATGGAACAGGAGACAAAACAGCAGAATTGTTTCATGGCCAAGCCCAATTGTACAGACTCATGTATCTTTGGATGTCTTCTTTATGTCTTAAGTGTGCCATTGAGCTCGAAATACCAGACATAATCCACGAGCATGGCCAACCCATCTCTCTTTCTCAGTTGGTATCAGATCTCAAAGTTCCACCCTCTAAAACTACCTTTCTAAAAGGGCTCATGCGCTTGCTGGCTCACAATGGCCTCTTCACCATCATCAAAAGCAACAACAATGAAGAAGAAAGCGAAGTATCGTATGATCTCACTTCTGCATCCCGGCTTCTTGTGAATGGCACAGACCATTGTTTATCTTCAATGGTTCAGTTGACTGTAAGCCCAGCTTTACTTGATTTGTATCAAAACTTGGGGAAATGGGTTCGTGGGGAGGAAAATACACTGAGAGAGACATCGTTTGGCGTAGGTGTTTATGAATTCCTTGCTCAAAACCCAGAAGATTTGGCAGTCTTCCAAGAAGCAATGGCTAGTGATTCCAGATTCATGAAACTGGTAATGAAAGATTTGGAATCTGTTTTTGATGGATTGAATTCCATAGTTGATGTTGGTGGTGGAACTGGTACAACTGCTAAGATTATCTGTGAAGCATTCCCTAAGTTGAAATGCACGGTGCTCGATCTTCCTGAGGTCGTCTCAAACTTATCTGGAAACTCCAATGTGAGCTTTGTTGGTGGGGACATGCTTAAATCCATCCCTCATGCTGATGCAGTGCTGATTAAGTGGGTTTTACATGACTGGGGTGATGATGATTGCTTAAAGATACTTAAAAATGCCAAGGAAGCTATTTCAGGCAATGGAAAAGGAGGAAAAGTGATCATCATAGATACAGTGTTGAATGAAAAAGAAGAGCAGCATGAAGTGCTAGAAACAAAGCTCTTACTCAACATAATGCTGGCGGCTGAATTCAATTCAAAAGAGAGATCCGAGGAAGAATGGAAGAAACTCTTCCTGAAAGCAGGCTTCACAGATTACCAGATATTTCCCATATTTGGCTTTAGGTCTCTCATTGTGCTAAATCCTTAG 1074 0.4171 MDGTGDKTAELFHGQAQLYRLMYLWMSSLCLKCAIELEIPDIIHEHGQPISLSQLVSDLKVPPSKTTFLKGLMRLLAHNGLFTIIKSNNNEEESEVSYDLTSASRLLVNGTDHCLSSMVQLTVSPALLDLYQNLGKWVRGEENTLRETSFGVGVYEFLAQNPEDLAVFQEAMASDSRFMKLVMKDLESVFDGLNSIVDVGGGTGTTAKIICEAFPKLKCTVLDLPEVVSNLSGNSNVSFVGGDMLKSIPHADAVLIKWVLHDWGDDDCLKILKNAKEAISGNGKGGKVIIIDTVLNEKEEQHEVLETKLLLNIMLAAEFNSKERSEEEWKKLFLKAGFTDYQIFPIFGFRSLIVLNP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3905g00007 357 PANTHER O-METHYLTRANSFERASE 16 341 IPR016461 GO:0008168
Pral3905g00007 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 357 IPR016461 GO:0008168
Pral3905g00007 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Pral3905g00007 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 354 IPR029063 -
Pral3905g00007 357 SUPERFAMILY "Winged helix" DNA-binding domain 8 110 IPR036390 -
Pral3905g00007 357 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Pral3905g00007 357 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Pral3905g00007 357 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Pral3905g00007 357 FunFam O-methyltransferase ZRP4 109 357 - -
Pral3905g00007 357 Gene3D Vaccinia Virus protein VP39 109 357 IPR029063 -
Pral3905g00007 357 Gene3D - 2 107 IPR036388 -
Pral3905g00007 357 CDD AdoMet_MTases 196 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3905g00007 Pral-Chr3905 46781 48173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3905g00007 29 343 Monolignol Biosynthesis Gene Families AT5G54160 29.907 3.51e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3905g00007 K22588 - gmx:100818724 392.504