Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3905g00006 ATGGATGAAATTGGAAACAAAATCAGCAACTTGTTTCATGGCCAAGCCCAACTGTATAAAGTCATGTATCTTTGGATGCCTCCTTTATGTCTAAAGTGTGCCATTGAGCTTGAAATACCAGACATAATCCACAAACATGGTCAGCCCATCCCTCTTTCTCAGTTGGTATCAGATCTCAAAGTTCCACCCTCTAAAACTACCTTTATAAGAGGGCTCATGCGCTTGCTGGCTCACAATGGCCTCTTCGCTATCATCAAAAGCAACAACAGTGAAAAGGAATGTGAAGTATCATATGATCTCACTTCGGCATCAAAACTTCTTGTGAGTGACTTGGAATCCGTTTTGGATGGATTAGGTTCCATAGTCGATGCTGGTGGTGGAAATGGTGCCACGGCTAAGATTATCAGGGAAGGATTCCCCAAGTTGAAATGCACAGTGCTTGATCTTCCTGAGGTTGTTGCAAACTTATCTGGAAATGCAAATTTGAGTTTTGTTGGTGGGGACATGCTCAAATCCATCCCTCATGCTGATGCAGTTTTGATTAAGTGGGTTTTACTTGATTGGGGTGATGATGATTGCATAAAGATACTTAAAAATGCCAAGAGAGCTATTTCAGGCAAAGGAAATGAAGGAAAAGTGATCATCATAGACATGGTGTTGGATGAAAAGCATGACCAGTATGAATGGCTAGAAACAAAGCTCCTAATCAACATAGCCTTGATAGCTGACCTTAATTCAAAAGCAAGATCTGAGGAAGAATGGAAGCAAGTCTTCTTGAAGGCAGGATTTAAGGATTACAAGATATTTCCTATATTTGGCCTTAGGTCTCTTATTGTGCTTCATCCCTAG 849 0.4087 MDEIGNKISNLFHGQAQLYKVMYLWMPPLCLKCAIELEIPDIIHKHGQPIPLSQLVSDLKVPPSKTTFIRGLMRLLAHNGLFAIIKSNNSEKECEVSYDLTSASKLLVSDLESVLDGLGSIVDAGGGNGATAKIIREGFPKLKCTVLDLPEVVANLSGNANLSFVGGDMLKSIPHADAVLIKWVLLDWGDDDCIKILKNAKRAISGKGNEGKVIIIDMVLDEKHDQYEWLETKLLINIALIADLNSKARSEEEWKQVFLKAGFKDYKIFPIFGLRSLIVLHP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3905g00006 282 Gene3D Vaccinia Virus protein VP39 116 268 IPR029063 -
Pral3905g00006 282 Gene3D - 3 107 IPR036388 -
Pral3905g00006 282 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Pral3905g00006 282 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 278 IPR029063 -
Pral3905g00006 282 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 107 282 IPR016461 GO:0008168
Pral3905g00006 282 PANTHER O-METHYLTRANSFERASE 17 110 IPR016461 GO:0008168
Pral3905g00006 282 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Pral3905g00006 282 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Pral3905g00006 282 Pfam O-methyltransferase domain 82 264 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3905g00006 Pral-Chr3905 42005 43701 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3905g00006 115 268 Monolignol Biosynthesis Gene Families AT5G54160 37.580 6.21e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3905g00006 - - gmx:100800912 278.87