Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3905g00001 ATGGATGAAACTGAAAACGAAATCACTGAGATGTTTCATGGCCAAGCCCAACTGTATAAGGTCATGTATCTTTGGATACCCTCTTTATGTCTAAAATGTGCCATTGAGCTTGAAATACCAAACATAATCTACAAACATGGCCAACCCATCCCTCTTTCTCAGTTGGTATCAACCCTCAAACTTCCACCCTCTAAAGCTACCTTTGTGAAAGGGCTCATGCAGTTGCTAGCTCACAATGGCCTCTTCACTATCATCAAAAGAACCAACAATGAAGAAGAAGAAGAAAGTGAAGTGGCATATGATCTCACTTCTGCATTAAAACTTCTTGTGAGTGGCACAGATCATTGTTTATCTCCAATGGTTCAATTGGTAGTAAACCCTACTATGATTTATTTGCATAATCACTTGGGGAAATGGGTTCATCAGAAGGAAAATTCAGTCAGAGAGACAATATCTGGTATGAGCCCTTGTGACTTTCTTAAGCAAAACCCAGCAGAATTGGCAGCCTTCCAAGAAGCAATGGCTAATGATTCTAGATTCTTGAAAATGGCACTGATCAAAGGCTTGGATTCTGTTTTGGACGGATTGGGTTCTATTGTTGATGTTGGTGGTGGAAATGGGACCACAGCTAAGAGAATATGCGAAGCATTCCCCAAATTGAAATACGCAGTGCTTGATCTTCTGAGACTGTAG 693 0.4069 MDETENEITEMFHGQAQLYKVMYLWIPSLCLKCAIELEIPNIIYKHGQPIPLSQLVSTLKLPPSKATFVKGLMQLLAHNGLFTIIKRTNNEEEEESEVAYDLTSALKLLVSGTDHCLSPMVQLVVNPTMIYLHNHLGKWVHQKENSVRETISGMSPCDFLKQNPAELAAFQEAMANDSRFLKMALIKGLDSVLDGLGSIVDVGGGNGTTAKRICEAFPKLKYAVLDLLRL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3905g00001 230 Gene3D Vaccinia Virus protein VP39 111 229 IPR029063 -
Pral3905g00001 230 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Pral3905g00001 230 Pfam O-methyltransferase domain 134 227 IPR001077 GO:0008171
Pral3905g00001 230 PANTHER O-METHYLTRANSFERASE 11 227 IPR016461 GO:0008168
Pral3905g00001 230 Gene3D - 1 109 IPR036388 -
Pral3905g00001 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 227 IPR029063 -
Pral3905g00001 230 FunFam Coniferyl alcohol 9-O-methyltransferase 1 109 - -
Pral3905g00001 230 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 230 IPR016461 GO:0008168
Pral3905g00001 230 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3905g00001 Pral-Chr3905 12058 12750 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3905g00001 29 227 Monolignol Biosynthesis Gene Families AT5G54160 27.053 2.84e-10 57.4