Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3884g00018 ATGGAGCTATTCCCTGCACAGCCAGATTTGTCTCTGCAAATCAGCCCTCCAAACAGCAAACCCGGTAGTTCAAATTGGAGGAGAGATGGTGGCGACGTGGATTTGGGGTTCTGGAAGAGAGCTTTGGACTCCACAAACTCATCACTCTCATTCTCATCAATGCCCAAATCCAAATCTTCCTGTGATAATAATCTCATTCATCATCATCACCACCATGCTCATAACTCCTTCGACCTCTCTCTCTCCTCCTCCAATAGTACTAATACTACATCCACAAGACCACCCCCTCCTTCTTCCTCGTCTTCTTCTTCTTCTTCTTCACTCTGCAACAACACCAACTCTAACCTCACTAACATCCACCGCCACCGTCATTTACTCCAAAACGGCAACAATAATGCCAATCCCTTGCCGTCGTCGTCGTTTCACTACTCCCACAACCACCACCAGAGTCTGGGCTTTCTCAGGCCCATCAGAGGAATCCCTCTCTACCAAAACCCCCCTCCTCCTCCTCCTTCTAATATTCCCTTTGGTGCTCTTATTGATGCTAATAATTATCCCACGCTTACTCCTGCTACCACTGTTCCTCCTCCTCCTCCTCCTTCGACAACCTCGTCGAGCCCTTTTCAATCTCACCACCAAGGTTTGATGAGGTCTAGGTTGTTGTCTCGTTTCCCTGCTAAGCGCAGCATGAGAGCTCCTCGGATGCGTTGGACTACAACCCTCCATGCTCGCTTTGTCCATGCCGTTGAGCTTCTCGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCTCATGTTAAATCTCATCTACAGATGTACCGAACGGTGAAAACCACAGATAAAGCCGCTGCTTCCTCGGGGCAATCTGATGTATATGATAATGGATCATCTGGAGATAATTCTGAAGATTTCATGTTTGATATGAACAATTCAAGAAGTTCTGATCTGTCTACCAAGCAAGCAAAAGAAAGTGCTAATCGTGATAAAGAACATCGCGGCCTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGCTGGATTACTGTGCAGGAAACTTGAGTTCTTTTGAGAAGGAAATGGATCCAGCAAAATGCCTAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATCTTTCAGGAACAAGCCCCAAGAAACCAAATTTGGATCTGGAGTTTAGCTTAGGGCAGCCACTTTGA 1248 0.4679 MELFPAQPDLSLQISPPNSKPGSSNWRRDGGDVDLGFWKRALDSTNSSLSFSSMPKSKSSCDNNLIHHHHHHAHNSFDLSLSSSNSTNTTSTRPPPPSSSSSSSSSSLCNNTNSNLTNIHRHRHLLQNGNNNANPLPSSSFHYSHNHHQSLGFLRPIRGIPLYQNPPPPPPSNIPFGALIDANNYPTLTPATTVPPPPPPSTTSSSPFQSHHQGLMRSRLLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSGQSDVYDNGSSGDNSEDFMFDMNNSRSSDLSTKQAKESANRDKEHRGLWSNSSREAWLHGKPKLDYCAGNLSSFEKEMDPAKCLSYERVSDGSASSDLSGTSPKKPNLDLEFSLGQPL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3884g00018 415 Gene3D - 232 289 - -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 290 348 - -
Pral3884g00018 415 SUPERFAMILY Homeodomain-like 230 286 IPR009057 -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 290 331 - -
Pral3884g00018 415 FunFam Myb family transcription factor 231 289 - -
Pral3884g00018 415 Pfam Myb-like DNA-binding domain 234 285 IPR001005 -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 77 115 - -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 384 415 - -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 76 115 - -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 11 25 - -
Pral3884g00018 415 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 78 414 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral3884g00018 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 286 IPR006447 GO:0003677
Pral3884g00018 415 MobiDBLite consensus disorder prediction 386 400 - -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 1 30 - -
Pral3884g00018 415 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3884g00018 Pral-Chr3884 105301 110601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3884g00018 103 414 G2-like Transcription Factor Family AT4G17695 41.349 3.44e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral3884g00018 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3884g00018 - - psat:127119781 430.639