Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3884g00009 ATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCCGATCCTTCAGGCAATACTCTTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACTGGAAAGAATGATAAACATAATAAAACACCAGGGGCATCTGCGAATGGAGTTCATTCAAAAAGTGGTGAAAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTGAGAATGACTCACAGCTGAAATCAGAGGGCAGGCAGGACTCTTTGGGAGCTGAACCATCTCAAAATGGAGGTTCGGTACATGCTCCTCAAAATGGGGGACTTAACGTACCTCACAATATGGTCAATCAGACTATGAGTATCGTGCCTATCTCTGCTGCGGGTGCTCCTGGTGGTGTTTCTGGTCCCACGACAAACTTAAATATAGGAATGGACTATTGGGGTGCACCCACTTCATCCTCTATTCCTGCAATGCGAGGAAAGGTTCCTTCAACTGCCGTTGCTGGAGGAATGGTTACTGCTGGATCACGGGAGGGTGCTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAGCTAAAGAGACAAAGACGGAAGCAATCTAACAGGGAATCAGCTCGCAGATCTAGACTGCGCAAGCAGGCGGAATGTGATGAACTAGCCCAGCGAGCTGAGGCTTTAAAAGAAGAGAATGCTTCTCTTCGCTCTGAAGTGAATCGGATAAGGAGTGAGTACGAACAACTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATTACCTGAGAATGAGGAACATAGGCCTACCCGGAATGACCAACACGTGGATAGTGACACTCAACAGGCTGAGCAGACGGAAGCCGTGCAGGGCAGTCGTTAA 1017 0.47 MCGVSSILCLLMVPHHIHMLQCILMVGSYPFSPFAMPSPNGIADPSGNTLGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNDKHNKTPGASANGVHSKSGESASEGTSEGSDANSENDSQLKSEGRQDSLGAEPSQNGGSVHAPQNGGLNVPHNMVNQTMSIVPISAAGAPGGVSGPTTNLNIGMDYWGAPTSSSIPAMRGKVPSTAVAGGMVTAGSREGAQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGELPENEEHRPTRNDQHVDSDTQQAEQTEAVQGSR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3884g00009 338 SMART brlzneu 234 298 IPR004827 GO:0003700|GO:0006355
Pral3884g00009 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 299 IPR004827 GO:0003700|GO:0006355
Pral3884g00009 338 Gene3D - 237 291 - -
Pral3884g00009 338 Pfam bZIP transcription factor 234 296 IPR004827 GO:0003700|GO:0006355
Pral3884g00009 338 SUPERFAMILY Leucine zipper domain 237 293 IPR046347 GO:0003700|GO:0006355
Pral3884g00009 338 MobiDBLite consensus disorder prediction 301 325 - -
Pral3884g00009 338 PANTHER G-BOX-BINDING FACTOR 3-RELATED 29 327 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral3884g00009 338 CDD bZIP_plant_GBF1 239 289 IPR045314 GO:0003700|GO:0006355
Pral3884g00009 338 MobiDBLite consensus disorder prediction 75 148 - -
Pral3884g00009 338 Pfam Disordered region downstream of MFMR 64 201 - -
Pral3884g00009 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Pral3884g00009 338 MobiDBLite consensus disorder prediction 234 257 - -
Pral3884g00009 338 Coils Coil 254 302 - -
Pral3884g00009 338 MobiDBLite consensus disorder prediction 296 338 - -
Pral3884g00009 338 MobiDBLite consensus disorder prediction 42 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3884g00009 Pral-Chr3884 36687 41281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3884g00009 1 332 bZIP Transcription Factor Family AT2G35530 56.598 2.19e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3884g00009 MFMR_assoc 2.7e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3884g00009 K09060 - gmx:778122 501.901