Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3884g00008 ATGGGTAGCGGTGACATGGATAAAACTCCGAAAGAGAAGGAGCCAAAGACACCTCCGGCTATGTCACAGGAGCAGTCTTCAACCCCTGGCACTGGAACGATTAATCCTGATTGGTCCGGCTTTCAGGCATATTCTCCAATGCCTCCACATGGGTTCTTAGCATCGAGTCCCCAGGCTCACCCATATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGTATATATGCTCATCCATCTATGCCTTCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCCGATCCTTCAGGCAATACTCTTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACTGGAAAGAATGATAAACATAATAAAACACCAGGGGCATCTGCGAATGGAGTTCATTCAAAAAGTGGTGAAAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTGAGAATGACTCACAGCTGAAATCAGAGGGCAGGCAGGACTCTTTGGGAGCTGAACCATCTCAAAATGGAGGTTCGGTACATGCTCCTCAAAATGGGGGACTTAACGTACCTCACAATATGGTCAATCAGACTATGAGTATCGTGCCTATCTCTGCTGCGGGTGCTCCTGGTGGTGTTTCTGGTCCCACGACAAACTTAAATATAGGAATGGACTATTGGGGTGCACCCACTTCATCCTCTATTCCTGCAATGCGAGGAAAGGTTCCTTCAACTGCCGTTGCTGGAGGAATGGTTACTGCTGGATCACGGGAGGGTGCTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAGCTAAAGAGACAAAGACGGAAGCAATCTAACAGGGAATCAGCTCGCAGATCTAGACTGCGCAAGCAGGCGGAATGTGATGAACTAGCCCAGCGAGCTGAGGCTTTAAAAGAAGAGAATGCTTCTCTTCGCTCTGAAGTGAATCGGATAAGGAGTGAGTACGAACAACTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATTACCTGAGAATGAGGAACATAGGCCTACCCGGAATGACCAACACGTGGATAGTGACACTCAACAGGCTGAGCAGACGGAAGCCGTGCAGGGCAGTCGTTAA 1230 0.4764 MGSGDMDKTPKEKEPKTPPAMSQEQSSTPGTGTINPDWSGFQAYSPMPPHGFLASSPQAHPYVWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPSGSYPFSPFAMPSPNGIADPSGNTLGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNDKHNKTPGASANGVHSKSGESASEGTSEGSDANSENDSQLKSEGRQDSLGAEPSQNGGSVHAPQNGGLNVPHNMVNQTMSIVPISAAGAPGGVSGPTTNLNIGMDYWGAPTSSSIPAMRGKVPSTAVAGGMVTAGSREGAQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGELPENEEHRPTRNDQHVDSDTQQAEQTEAVQGSR 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3884g00008 409 MobiDBLite consensus disorder prediction 114 229 - -
Pral3884g00008 409 MobiDBLite consensus disorder prediction 146 219 - -
Pral3884g00008 409 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700|GO:0006355
Pral3884g00008 409 MobiDBLite consensus disorder prediction 372 396 - -
Pral3884g00008 409 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700|GO:0006355
Pral3884g00008 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700|GO:0006355
Pral3884g00008 409 MobiDBLite consensus disorder prediction 304 328 - -
Pral3884g00008 409 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 398 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pral3884g00008 409 MobiDBLite consensus disorder prediction 1 41 - -
Pral3884g00008 409 Pfam Disordered region downstream of MFMR 135 272 - -
Pral3884g00008 409 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700|GO:0006355
Pral3884g00008 409 MobiDBLite consensus disorder prediction 19 40 - -
Pral3884g00008 409 MobiDBLite consensus disorder prediction 367 409 - -
Pral3884g00008 409 Coils Coil 325 373 - -
Pral3884g00008 409 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Pral3884g00008 409 Gene3D - 308 362 - -
Pral3884g00008 409 MobiDBLite consensus disorder prediction 1 18 - -
Pral3884g00008 409 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700|GO:0006355
Pral3884g00008 409 SMART brlzneu 305 369 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3884g00008 Pral-Chr3884 36687 42291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3884g00008 1 403 bZIP Transcription Factor Family AT2G35530 63.659 2.39e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3884g00008 MFMR_assoc 4.1e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3884g00008 K09060 - gmx:778122 668.307