Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3884g00008 | ATGGGTAGCGGTGACATGGATAAAACTCCGAAAGAGAAGGAGCCAAAGACACCTCCGGCTATGTCACAGGAGCAGTCTTCAACCCCTGGCACTGGAACGATTAATCCTGATTGGTCCGGCTTTCAGGCATATTCTCCAATGCCTCCACATGGGTTCTTAGCATCGAGTCCCCAGGCTCACCCATATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCACATCCATATGTTGCAATGTATCCTCATGGTGGTATATATGCTCATCCATCTATGCCTTCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCCGATCCTTCAGGCAATACTCTTGGCAGCATGGAAGCTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACTGGAAAGAATGATAAACATAATAAAACACCAGGGGCATCTGCGAATGGAGTTCATTCAAAAAGTGGTGAAAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTGAGAATGACTCACAGCTGAAATCAGAGGGCAGGCAGGACTCTTTGGGAGCTGAACCATCTCAAAATGGAGGTTCGGTACATGCTCCTCAAAATGGGGGACTTAACGTACCTCACAATATGGTCAATCAGACTATGAGTATCGTGCCTATCTCTGCTGCGGGTGCTCCTGGTGGTGTTTCTGGTCCCACGACAAACTTAAATATAGGAATGGACTATTGGGGTGCACCCACTTCATCCTCTATTCCTGCAATGCGAGGAAAGGTTCCTTCAACTGCCGTTGCTGGAGGAATGGTTACTGCTGGATCACGGGAGGGTGCTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAGCTAAAGAGACAAAGACGGAAGCAATCTAACAGGGAATCAGCTCGCAGATCTAGACTGCGCAAGCAGGCGGAATGTGATGAACTAGCCCAGCGAGCTGAGGCTTTAAAAGAAGAGAATGCTTCTCTTCGCTCTGAAGTGAATCGGATAAGGAGTGAGTACGAACAACTGCTCTCAGAAAATGCTGCCCTCAAGGAAAAACTTGGGGAATTACCTGAGAATGAGGAACATAGGCCTACCCGGAATGACCAACACGTGGATAGTGACACTCAACAGGCTGAGCAGACGGAAGCCGTGCAGGGCAGTCGTTAA | 1230 | 0.4764 | MGSGDMDKTPKEKEPKTPPAMSQEQSSTPGTGTINPDWSGFQAYSPMPPHGFLASSPQAHPYVWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPSGSYPFSPFAMPSPNGIADPSGNTLGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKNDKHNKTPGASANGVHSKSGESASEGTSEGSDANSENDSQLKSEGRQDSLGAEPSQNGGSVHAPQNGGLNVPHNMVNQTMSIVPISAAGAPGGVSGPTTNLNIGMDYWGAPTSSSIPAMRGKVPSTAVAGGMVTAGSREGAQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSEYEQLLSENAALKEKLGELPENEEHRPTRNDQHVDSDTQQAEQTEAVQGSR | 409 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 114 | 229 | - | - | |
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 146 | 219 | - | - | |
Pral3884g00008 | 409 | CDD | bZIP_plant_GBF1 | 310 | 360 | IPR045314 | GO:0003700|GO:0006355 | |
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 372 | 396 | - | - | |
Pral3884g00008 | 409 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 312 | 327 | IPR004827 | GO:0003700|GO:0006355 | |
Pral3884g00008 | 409 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 307 | 370 | IPR004827 | GO:0003700|GO:0006355 | |
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 304 | 328 | - | - | |
Pral3884g00008 | 409 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 398 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Pral3884g00008 | 409 | Pfam | Disordered region downstream of MFMR | 135 | 272 | - | - | |
Pral3884g00008 | 409 | SUPERFAMILY | Leucine zipper domain | 308 | 364 | IPR046347 | GO:0003700|GO:0006355 | |
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 19 | 40 | - | - | |
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 367 | 409 | - | - | |
Pral3884g00008 | 409 | Coils | Coil | 325 | 373 | - | - | |
Pral3884g00008 | 409 | Pfam | G-box binding protein MFMR | 1 | 96 | IPR012900 | - | |
Pral3884g00008 | 409 | Gene3D | - | 308 | 362 | - | - | |
Pral3884g00008 | 409 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Pral3884g00008 | 409 | Pfam | bZIP transcription factor | 305 | 367 | IPR004827 | GO:0003700|GO:0006355 | |
Pral3884g00008 | 409 | SMART | brlzneu | 305 | 369 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3884g00008 | Pral-Chr3884 | 36687 | 42291 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3884g00008 | 1 | 403 | bZIP Transcription Factor Family | AT2G35530 | 63.659 | 2.39e-170 | 481 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Pral3884g00008 | MFMR_assoc | 4.1e-60 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3884g00008 | K09060 | - | gmx:778122 | 668.307 |