Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3884g00006 ATGGCCGTAGCACAAGCTGAGTTTGAGCATCCAAGGAAGGCCTTCGGATGGGCTGCTGGGGATTCTTCTGGCCTTCTCACTCCTTTCAACTTCTCTCGAAGAGAAACCGGAGACAAAGATGTGACCTTTAAAGTCCTTTACTGTGGGATATGCCATTCCGACCTCCACATGCTCAAGAATGAATGGGGCTTCTCCGTCTATCCACTCGTACCTGGGCATGAGATTGTTGGGGTGGTGACAGAAGTTGGAAGCAAGGTGGAAAAGTTCAGAGTTGGAGACAGAGTTGGTGTGGGATGTTTGGTTGGTTCGTGCAGATCCTGTGGAAGTTGTTCTGACGATCTTGAGAATCACTGTTCAAAGTATATTCTCACATATGGAGCCCAGTACGTAGATGGGACTATCACATACGGAGGTTACTCTGATTTTATGGTTGCAGATGAGCATTTTGTGGTTCGCATTCCAGATGCTTTGCCTCTTGATTCTGCAGGTCCTCTGCTTTGTGCTGGGATCACTGTGTATAGCCCTTTGAGGTATTTTGGTCTGGACAAGCCTAACCTTCACGTGGGTGTGGTTGGTCTCGGTGGGCTTGGCCATATGGCTGTCAAGTTTGCCAAAGCCTTTGGAGCTAAGGTCACTGTCATAAGCACTTCTCCTAACAAGAAGAAGGAAGCCATTGAACATCTTGGAGCTGATTCCTTTATTGTCAGCCGTGAGCAAGATCAGATGCAGGCTGCGATGGGCACATTTGATGGCATAATAGACACAGTTTCTGCAGTGCATGCTCTTTTGCCTTTGATTGGTCTACTGAAGCCGAATGGCAAACTGGTGTTGGTTGGTGCGCCTGAGAGGCCTCTGGAATTGCCAGTATTTCCTTTACTTTGGGGGAGGAAGATAGTGGCCGGAAGTGGAATTGGAGGGATGAAGGCGACGCAAGAGATGGTAGATTTTGCAGCCAAGCATAACGTGAGACCAGACATAGAAGTGATTCCAATGGATTACGTGAACACTGCAATGGAGCGACTACTTAAAGCTGATGTCAAGTATCGTTTTGTGATTGACATTGGCAACACAATGAAGAAGCCAACCTCTTAG 1092 0.4762 MAVAQAEFEHPRKAFGWAAGDSSGLLTPFNFSRRETGDKDVTFKVLYCGICHSDLHMLKNEWGFSVYPLVPGHEIVGVVTEVGSKVEKFRVGDRVGVGCLVGSCRSCGSCSDDLENHCSKYILTYGAQYVDGTITYGGYSDFMVADEHFVVRIPDALPLDSAGPLLCAGITVYSPLRYFGLDKPNLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFIVSREQDQMQAAMGTFDGIIDTVSAVHALLPLIGLLKPNGKLVLVGAPERPLELPVFPLLWGRKIVAGSGIGGMKATQEMVDFAAKHNVRPDIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTMKKPTS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3884g00006 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 322 IPR036291 -
Pral3884g00006 363 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Pral3884g00006 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 325 354 - -
Pral3884g00006 363 SUPERFAMILY GroES-like 23 184 IPR011032 -
Pral3884g00006 363 PANTHER ALDEHYDE REDUCTASE 7 358 IPR047109 GO:0016616
Pral3884g00006 363 FunFam Cinnamyl alcohol dehydrogenase 168 324 - -
Pral3884g00006 363 CDD CAD1 15 353 IPR047109 GO:0016616
Pral3884g00006 363 FunFam Uncharacterized protein 17 167 - -
Pral3884g00006 363 Gene3D - 168 324 - -
Pral3884g00006 363 SMART PKS_ER_names_mod 20 352 IPR020843 GO:0016491
Pral3884g00006 363 Gene3D - 17 354 - -
Pral3884g00006 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Pral3884g00006 363 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3884g00006 Pral-Chr3884 32793 34676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3884g00006 12 359 Monolignol Biosynthesis Gene Families AT4G37990 71.552 5.24e-174 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3884g00006 K23232 - gmx:100816901 588.956