Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3884g00005 ATGGCCGGAGCACAAGCTTTTGAGTTTGAGCATCCAAGGAAGGCCTTCGGATGGGCTGCTAGGGATTCTTCTGGCCTTCTCTCTCCTTTCAACTTCTCTCGAAGAGAAACCGGAGACAAAGATGTCACTTTCAAAGTCCTTTACTGTGGAATATGCCATTCCGACCTCCACATGCTCAAGAACGACTGGGGCTTCTCTGTCTATCCACTCGTACCTGGGCATGAGATTGTTGGGGTGGTGACGGAAGTTGGAAGCAAGGTGGAAAAGTTCAGAGTTGGAGACAGAGTCGGTGTGGGATGTTTGGTTGGTTCGTGCAGATCCTGTGGAAGTTGTTCTGACGATCTTGAGAATCACTGTTCAAAGTATATTCTCACATATGGAGCCAAGTACGTGGATGGGACTATCACATATGGAGGTTACTCTGATTTTATGGTTGCAGATGAGCATTTTGTGGTTCGCATTCCAGAGGCTTTGCCTCTTGATTCTGCAGGTCCTCTGCTTTGTGCCGGGATCACTGTGTATAGCCCTTTGAGGTACTTCGGTCTGGACAAGCCTGGCCTTCATGTGGGCGTGGTTGGTCTCGGTGGGCTTGGCCATATGGCTGTCAAGTTTGCCAAAGCCTTTGGAGCTAAGGTCACTGTCATAAGCACTTCTCCTAACAAGAAGAAGGAAGCCATTGAACATCTTGGAGCTGATTCCTTCATTGTCAGCCGTGAGCAAGATCAGATGCAGGCTGCGATGGGCACATTTGATGGCATAATAGACACAGTTTCTGCAGTGCATGCTCTTTTGCCTTTGATTGGTCTACTGAAGCCGAATGGCAAACTTGTGTTGGTTGGTGCGCCTGAGAGGCCTCTGGAATTGCCAGTATTTCCTTTACTTTCGGGGAGGAAGACAGTGGCCGGAAGTGGAATTGGAGGGATGAAGGAGACGCAAGAGATGGTAGATTTTGCAGCCAAGCATAACGTGAGACCAGACATAGAAGTGATTCCAATGGATTACGTTAACACTGCAATAGAGCGACTCCTTAAAGCTGATGTCAGGTATCGTTTTGTGATTGACATTGGCAACACAATGATGAAGCCAACCTCTTAG 1095 0.4813 MAGAQAFEFEHPRKAFGWAARDSSGLLSPFNFSRRETGDKDVTFKVLYCGICHSDLHMLKNDWGFSVYPLVPGHEIVGVVTEVGSKVEKFRVGDRVGVGCLVGSCRSCGSCSDDLENHCSKYILTYGAKYVDGTITYGGYSDFMVADEHFVVRIPEALPLDSAGPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFIVSREQDQMQAAMGTFDGIIDTVSAVHALLPLIGLLKPNGKLVLVGAPERPLELPVFPLLSGRKTVAGSGIGGMKETQEMVDFAAKHNVRPDIEVIPMDYVNTAIERLLKADVRYRFVIDIGNTMMKPTS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3884g00005 364 FunFam Uncharacterized protein 18 168 - -
Pral3884g00005 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Pral3884g00005 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Pral3884g00005 364 FunFam Cinnamyl alcohol dehydrogenase 169 325 - -
Pral3884g00005 364 Gene3D - 169 325 - -
Pral3884g00005 364 PANTHER ALDEHYDE REDUCTASE 9 359 IPR047109 GO:0016616
Pral3884g00005 364 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
Pral3884g00005 364 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Pral3884g00005 364 Gene3D - 18 355 - -
Pral3884g00005 364 SUPERFAMILY GroES-like 22 186 IPR011032 -
Pral3884g00005 364 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Pral3884g00005 364 CDD CAD1 16 354 IPR047109 GO:0016616
Pral3884g00005 364 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3884g00005 Pral-Chr3884 24316 26340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3884g00005 13 363 Monolignol Biosynthesis Gene Families AT4G37990 71.510 1.90e-173 485