Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3884g00004 ATGAACTGTCTATTTCGTTTTTTCAGAGAAACCGGAGAGAAAGATGTCACTTTCAAAGTCCTTTACTGTGGAATATGCCATTCCGACCTCCACATGCTCAAGAATGAATGGGGCTTCTCCGTCTATCCACTCGTACCTGGGCATGAGATTGTTGGGGTGGTGACGGAAGTTGGAAGCAAGGTGGAAAAGTTCAGAGTTGGAGACAGAGTCGGTGTGGGATGTTTGGTTGGTTCGTGCAGATCCTGTGGAAGTTGTTCTGAGGATCTTGAGAATCACTGTTCAGAGCAAATTCTCACATATGGAGCCAAGTACGTGGATGGGACTATCACATATGGAGGTTACTCTGATTTTATGGTTGCAGATGAGCATTTTGTGGTTCGCATTCCAGATGCTTTGCATCTTGATTCTGCAGGTCCTCTGCTTTGTGCCGGGATCACTGTGTATAGCCCTTTGAGGTACTTTGGTCTGGACAAGCCTGGCCTTCATGTGGGTGTGGTTGGTCTCGGTGGGCTCGGCCATATGGCCGTCAAGTTTGCCAAAGCCTTTGGAGCTAAGGTCACTGTCATAAGCACTTCTCCTAACAAGAAGAAGGAAGCCATTGAACATCTTGGAGCTGATTCCTTCATTGTCAGCCGTGAGCAAGATCAGATGCAGGCTGCGTTGGGCACATTTGATGGCATAATAGACACAGTTTCTGCAGTGCATGCTCTTTTGCCTTTGATTGGTCTACTGAAGCCGAATGGCAAACTGGTGTTGGTTGGTGCGCCTGAGAGGCCTCTGGAATTGCCAGTATTTCCTTTACTTTCGGGGAGGAAGACAGTGGCCGGAAGTGGAATTGGAGGGATGAAGGAGACGCAAGAGATGGTAGATTTTGCAGCCAAGCATAACGTGAGACCAGACATAGAAGTAATTCCAATGGATTATGTGAACACTACAATGGAGCGACTCCTTAAAGCTGATGTCAGGTATCGTTTTGTGATTGACATTGGCAACACAGTGATGAAGCCAACCTCAGAGATTTGCATCCACATATGCATGATTCGAGATTTTGGGGAAGAAAAATAG 1065 0.4685 MNCLFRFFRETGEKDVTFKVLYCGICHSDLHMLKNEWGFSVYPLVPGHEIVGVVTEVGSKVEKFRVGDRVGVGCLVGSCRSCGSCSEDLENHCSEQILTYGAKYVDGTITYGGYSDFMVADEHFVVRIPDALHLDSAGPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFIVSREQDQMQAALGTFDGIIDTVSAVHALLPLIGLLKPNGKLVLVGAPERPLELPVFPLLSGRKTVAGSGIGGMKETQEMVDFAAKHNVRPDIEVIPMDYVNTTMERLLKADVRYRFVIDIGNTVMKPTSEICIHICMIRDFGEEK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3884g00004 354 Gene3D - 143 299 - -
Pral3884g00004 354 FunFam Putative cinnamyl alcohol dehydrogenase 6 300 329 - -
Pral3884g00004 354 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 47 61 IPR002328 GO:0008270|GO:0016491
Pral3884g00004 354 PANTHER ALDEHYDE REDUCTASE 9 332 IPR047109 GO:0016616
Pral3884g00004 354 FunFam Cinnamyl alcohol dehydrogenase 143 299 - -
Pral3884g00004 354 CDD CAD1 9 328 IPR047109 GO:0016616
Pral3884g00004 354 FunFam Uncharacterized protein 2 142 - -
Pral3884g00004 354 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 297 IPR036291 -
Pral3884g00004 354 SUPERFAMILY GroES-like 10 160 IPR011032 -
Pral3884g00004 354 Gene3D - 9 329 - -
Pral3884g00004 354 SMART PKS_ER_names_mod 2 327 IPR020843 GO:0016491
Pral3884g00004 354 Pfam Alcohol dehydrogenase GroES-like domain 14 127 IPR013154 -
Pral3884g00004 354 Pfam Zinc-binding dehydrogenase 170 293 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3884g00004 Pral-Chr3884 17111 18656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3884g00004 9 340 Monolignol Biosynthesis Gene Families AT4G37990 71.687 2.61e-160 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3884g00004 K23232 - mnt:21385909 550.821