Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3882g00021 ATGGTTTCATCAGGAGGGAAATGGCTAGGATTTGTGACAGCCATATGGGTTCAAGCAATCAGTGGAAACAATTACACATTCGCCAATTATTCTCACGCATTGAAGAGTCTAATGGCACTCACACAGCTTGAGCTTAACAATCTCTCTGTTGCTAAAGACGTTGGTAAGGCCTTTGGTCTTCTCTCTGGTCTCGCCTCTGATCTTTGGCCGCCTTCTGTCATTCTCCTCATTGGAGCTTTCATGGGGTTCATTGGCTATGGAGGTCAATGGCTCGTTGTTAGCCAGAGAATCGCTCCTCTCCCTTATTGGCTTATGTGTGTGTTGTTATGTTTGGGAGGGAATAGTTCAACCTGGATGAACACAGCTGTTCTAGTGACTTGTATGAGGAATTTCCCTCAAAATCGAGGTCCAGTTTCTGGGATTCTTAAGGGCTATGTAGGTCTCAGTACTGCAATTTTCACCGACACATGTACAGCTCTTTTTTCCTCATCTCCTTCTCCATTTCTCCTCATGCTCACAATTGTTCCAGCTATTATCTGCTTCATTGCTTCTCTTGCCCTTCATGAAACCCAGCCAGCTTCAAATTCTGCAGAAGTCAAGCAAGAAACCCAATTCTTCAATTTGTTCAACATTATTGCTGTCACAGTAGCTTTTTACCTCTTGGCATATGACATCACTGGACGCCATGGCCGTCTTCTTTCATTGCTTTTCACCTTGGGGCTTCTTATTTTACTAGCCATGCCACTTCTTGTTCCTTTGTGTCCATTTATCTTCAAATCAAACCTCCTTGTTTCTGATGCTGAACAGCAGATTGATGAACCATTGCTTGCTGAAAATAAAGTAGAGAAACAAGATGGTTCTGTAAGTGGAAGTGTTACGGTGGAAAAGCAAGTTGAAGTAAACCGACAACAACCCATGATAGGAGAGGAACATACAGTCGTTGAAATGGTTAAGACAATTGATTTCTGGTTCTTGTTTATGTCTTTTCTATGTGGGGTTGGAACGGGATTGTGTGTGATGAACAACATGGGACAGATTGGATTGGCAAGTGGTTACACTGATGTTTCTATATTCATATCATTTATAAGCATCTGGGGATTCTTTGGACGCATTATTTCTGGCACACTCTCAGAGTACTTTATCAAGAAATCAGGCATGGCAAGGCCATTTTGGAACGCAGGTTCACAAATATTAATGGTGGTGGGCTTCATGGGAATGGCAATGGCATTACCAGGATCAATTTACATAGGATCAATCATAGTTGGAATATGTTATGGGGTTCGTTTGACTATTACAACAGCATCAGCTTCAGAATTATTTGGGTTGAAGTACTATGGTTTATTATACAACATTCTGATTCTGAATCTTCCTCTTGGTTCTTTCCTATTTTCTAGTCTTATTGCTGGGAATTTGTATGATGCTGAAGCTGCTAGGCAAAATGGAGGAGGAAACACTTGTATTGGATCACAATGTTACATGCTTGTGTTTGTGATTATGGCTCTTGTTTGTGTCATTGGATTTGGGCTGGACTTAGTGCTAGCTATTAGAACTAAGAAAATCTATTCCAAGATCCATCAGGAGAAGACATCATAA 1593 0.4118 MVSSGGKWLGFVTAIWVQAISGNNYTFANYSHALKSLMALTQLELNNLSVAKDVGKAFGLLSGLASDLWPPSVILLIGAFMGFIGYGGQWLVVSQRIAPLPYWLMCVLLCLGGNSSTWMNTAVLVTCMRNFPQNRGPVSGILKGYVGLSTAIFTDTCTALFSSSPSPFLLMLTIVPAIICFIASLALHETQPASNSAEVKQETQFFNLFNIIAVTVAFYLLAYDITGRHGRLLSLLFTLGLLILLAMPLLVPLCPFIFKSNLLVSDAEQQIDEPLLAENKVEKQDGSVSGSVTVEKQVEVNRQQPMIGEEHTVVEMVKTIDFWFLFMSFLCGVGTGLCVMNNMGQIGLASGYTDVSIFISFISIWGFFGRIISGTLSEYFIKKSGMARPFWNAGSQILMVVGFMGMAMALPGSIYIGSIIVGICYGVRLTITTASASELFGLKYYGLLYNILILNLPLGSFLFSSLIAGNLYDAEAARQNGGGNTCIGSQCYMLVFVIMALVCVIGFGLDLVLAIRTKKIYSKIHQEKTS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3882g00021 530 CDD MFS_Mch1p_like 6 506 - -
Pral3882g00021 530 Gene3D MFS general substrate transporter like domains 7 204 IPR036259 -
Pral3882g00021 530 SUPERFAMILY MFS general substrate transporter 36 519 IPR036259 -
Pral3882g00021 530 Pfam Nodulin-like 7 253 IPR010658 -
Pral3882g00021 530 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3882g00021 Pral-Chr3882 358326 360406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3882g00021 7 530 Nodulin-like Gene Family AT4G34950 61.765 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3882g00021 - - rcu:8260661 699.123