Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral387g00001 ATGGCTCCTCGTGCCGACGAGTGCGACGAAGATGAGCTCTCCTCCAGCGAAGACGATGACAGCTTCAATGAGGACTTGGAAGCTCTCGCACGAGCCTGCAAGATCGCCGGCACCAACCCTGATGACCTTAAACCCACTTCTACCGACGGTCCCGACGATGAGAACGCAGACGCAGTGGTTCCGAAAGCTCCTGACCCGCTGTTGGGCCCGGGCGATGCTCTCGTTCCTGTGTCAGACTCGGACGACGAGCAGAGTGACCTTCAGTATCTTAAAAGAGTACAGGAGCGTTACCAGCCTTCATCTCTCAAGCCATTGAATGTTCTTCCAGCGTTTTCTCTGTCTGATGACGAGGAAGATGATGTGGAGTTACTCCAGGCTATTAGGAGACGCTTTGCCTCCTATGATAGAGGCCCTGATGAAGATAATGAGGATAAAATGGCTCAGGGAGCTCATACCTCCGGTCCAGGCTCTGAGGAGGAATATGATAACAGCGTGACATTTAAGGGATTAGAGCCCGGTGAATCATGCCCTGTTTCTCAGGATGCTATTAAGACCACCAGTTTATTGACTGGTGATGGTGAGAGACATCCTTTTAACATCAACGAGAGGTGTAAACCCGAGGCTTGCAAGTCATCCAAGTTATCGGACAAAGGATCAAACTTTCCTTTGTCTGCTCAGGTTCTTTTTGATGCAATAAAAAAGAATAGATCTTTCCAGAGGTTACTTCGAAGTAAGTTGATTCAGATGGAAGCAAAAATTCAAGAAAACAGACAGCTAAGGGAAAGAGTAAAACTTCTTAAAGAGTTTCAGGTTTCTTGCATAAGAAGAACAGGGCAAGCTATATCACTGAAAAAGGATCCCCGTGTCCTTTTAATATCAATAAGAAAGTCTCCTGCTGCAAGTAGCACGAAGATTAATGATAAAAAAATATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATAGGAAAAAATGGTCTAATGTGGAGAGGGAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAAATGGTGCTTCAAATGTCAATGAATCAAGACAGTTCAGGGTGGTTGTGTGAATATGCGGATAACTTTGATACCATACTTGCATCTATTAAAGATCTTGAGATTACGCCTGAGAACATTAGAAAGTTTCTGCCTAAATTCAATTGGGATCAGTTGGCTTCCAAGTATGTTGTTGGTCGTACAGGTGCAGAATGTGAAGCAAGGTGGTTAAATTGTGAAGATCCCTTGATCAATCATAGCCCATGGACCTGTGAGGAGGACAAATGGCTGTTGCACATTATCCAAGAGATTGGCAATAGGAACTGGTTCAAAATTGCTGAATTTTTAACCACAAGTAGGACCCCATTTCAATGCTTGGCACGATACCAAAGGAGTTTAAATCCTTCCATGCTAAATAGTGAATGGACTGAGGAAGAAGATGCTCTACTTCGTTCTGCTGTCACAATTTTTGGTGCGAGCGATTGGCAGTCTGTAGCTTCCGTCTTAGAACGAAGGACTGGACCCCAATGCTCTAATAGATGGAAGAAGTCCCTCTGTCCTGATAGGAAAGGGAGCTTTACTGTAGAAGAAGATGAGCGCTTAACAGTGGCTGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTATTGTTCCTGGCCGGACCCAAGCTCAATGTAGAGACAGATACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCAAGATTGAAAAAAGCAATTGCCAAACATGGATTCTGCTGGTCAAAGGTTGCTGCAGATGTGCCTCCAAGAACTGACAGTCAGTGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCTATGCTCCAAGCAGCTAGAAAGATGAAAAAATCCGCTCTTATCAGTAACTTTGTTGATCGAGAGTCTGAACGGCCTTGTCTTTCTCTAAATGATTTTCTTCCCTTGGCAACGTTAGATCCGCCATCTGATCCAGATGTTGTGAACCTCCCACAGAAGCGGAAGAATAAGTCAAGCACTTCTAAGAAAAAGAGGCCCCAAAAACGTACAAAGAAGGCTCAAAGTTGTCTCAAGAAGCCACAGACGGACAAGGTTGAACCTTGTAATGGACATGGTCCTGAACCACATTTGGAGGACAACTCTGTTGATGCAATGCATGATCATTCTCCGCTGGACTCGGTTGTGACGACAACGAATGACCAAGGAGATTTTGTGGACATAATAATATCGATAACCTAA 2322 0.4444 MAPRADECDEDELSSSEDDDSFNEDLEALARACKIAGTNPDDLKPTSTDGPDDENADAVVPKAPDPLLGPGDALVPVSDSDDEQSDLQYLKRVQERYQPSSLKPLNVLPAFSLSDDEEDDVELLQAIRRRFASYDRGPDEDNEDKMAQGAHTSGPGSEEEYDNSVTFKGLEPGESCPVSQDAIKTTSLLTGDGERHPFNINERCKPEACKSSKLSDKGSNFPLSAQVLFDAIKKNRSFQRLLRSKLIQMEAKIQENRQLRERVKLLKEFQVSCIRRTGQAISLKKDPRVLLISIRKSPAASSTKINDKKISPMCYGPAENAHVAKYRMVLERSPFSLDRKKWSNVERENLAKGIKQQFQEMVLQMSMNQDSSGWLCEYADNFDTILASIKDLEITPENIRKFLPKFNWDQLASKYVVGRTGAECEARWLNCEDPLINHSPWTCEEDKWLLHIIQEIGNRNWFKIAEFLTTSRTPFQCLARYQRSLNPSMLNSEWTEEEDALLRSAVTIFGASDWQSVASVLERRTGPQCSNRWKKSLCPDRKGSFTVEEDERLTVAVHLFGRKWNQIAKXVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKKAIAKHGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMKKSALISNFVDRESERPCLSLNDFLPLATLDPPSDPDVVNLPQKRKNKSSTSKKKRPQKRTKKAQSCLKKPQTDKVEPCNGHGPEPHLEDNSVDAMHDHSPLDSVVTTTNDQGDFVDIIISIT 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral387g00001 774 CDD SANT 493 537 IPR001005 -
Pral387g00001 774 CDD SANT 544 587 IPR001005 -
Pral387g00001 774 Coils Coil 242 262 - -
Pral387g00001 774 Gene3D - 439 489 - -
Pral387g00001 774 Gene3D - 492 541 - -
Pral387g00001 774 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 588 642 IPR017930 -
Pral387g00001 774 MobiDBLite consensus disorder prediction 731 748 - -
Pral387g00001 774 MobiDBLite consensus disorder prediction 698 717 - -
Pral387g00001 774 MobiDBLite consensus disorder prediction 683 759 - -
Pral387g00001 774 Pfam Myb-like DNA-binding domain 441 502 - -
Pral387g00001 774 Pfam Myb-like DNA-binding domain 545 604 - -
Pral387g00001 774 ProSiteProfiles Myb-like domain profile. 486 537 IPR001005 -
Pral387g00001 774 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 433 485 IPR017930 -
Pral387g00001 774 SMART sant 437 487 IPR001005 -
Pral387g00001 774 SMART sant 338 434 IPR001005 -
Pral387g00001 774 SMART sant 592 640 IPR001005 -
Pral387g00001 774 SMART sant 490 539 IPR001005 -
Pral387g00001 774 SMART sant 541 589 IPR001005 -
Pral387g00001 774 Gene3D - 592 640 - -
Pral387g00001 774 Gene3D - 542 591 - -
Pral387g00001 774 ProSiteProfiles Myb-like domain profile. 588 638 IPR001005 -
Pral387g00001 774 MobiDBLite consensus disorder prediction 134 172 - -
Pral387g00001 774 MobiDBLite consensus disorder prediction 1 87 - -
Pral387g00001 774 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 14 737 - -
Pral387g00001 774 SUPERFAMILY Homeodomain-like 567 641 IPR009057 -
Pral387g00001 774 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 486 541 IPR017930 -
Pral387g00001 774 MobiDBLite consensus disorder prediction 10 24 - -
Pral387g00001 774 ProSiteProfiles Myb-like domain profile. 541 587 IPR001005 -
Pral387g00001 774 SUPERFAMILY Homeodomain-like 413 482 IPR009057 -
Pral387g00001 774 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 542 582 IPR017930 -
Pral387g00001 774 CDD SANT 596 638 IPR001005 -
Pral387g00001 774 ProSiteProfiles Myb-like domain profile. 433 485 IPR001005 -
Pral387g00001 774 SUPERFAMILY Homeodomain-like 471 537 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral387g00001 Pral-Chr387 2252 9699 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral387g00001 219 751 MYB-Related Transcription Factor Family AT3G18100 50.545 1.60e-176 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral387g00001 Myb_DNA-bind_6 8.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral387g00001 K09422 - gmx:100818474 808.905