Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3879g00001 ATGAATAATGAGGCGTCAACAATTGGGATATGGGGAATGGGAGGGACAGGAAAAACAGCTTTAGCAACTCTTGTGAATAACAAGCTTTTAGAAGAAGCGGGTGATGACTTTGACCATATTATTTGGGTTACTATGTCACAAAGTGATAATAGAGTTTACCAATTGCAAAAAGCCATTGCAGGATCAATTAATTTGGACATATCAGATGAGTGTGATCTTAAAAGAATATCTGGGAAATTATTGCAGGCATCCAGACACATAAAGAGATGTCTTCTCATTTTAGACAATGTTTGGGATCCTATCTTCCTAGAAGAGGTTGGATTTCCTCTTTCAAATGATGGGATTAAACTAATCTTGACAACTCGTTCCTGGGAAGTGTGTCAAAATATGAATTGCACGAAAAAAACAATAAATATAAAGCCTTTAGATGAAGAAGATAGTTGGGATTTGTTTGAAAAGACTCTTGGAATCCATCAAATACAGTCAAGTAGAGTGGAGCCTATAGCAAGGGCCATGGCAAAACAATGTGAGGGTTTGCCCCTTGCTATTATTACAATAGCAAGAAGTATGAGGGGGAAAGAAGACTACCTGAGGGAATGGAATCACATGTTGGAAGGCATGCTAGAGGATATGGATGAGAGGATATTTTCAGCATTAAAATCAAGCTATGCTTGCTTAAATAATAAATTGCAAAGATTGTTTTTGTACTATGCATTAACAGCCAAGGAAAATGTCAGGGGCAGTGATGTTGAGCTTTTGATTAGGAGATTTTTCTCCATGGGATGGACAGATGAGACAGATAGCTTGGAGATGCAATATGATGAATGTTACACGATGTTGCATAAATTAAAAAATAGCAGCTTGTTGATGGAAAAAAATGGACGGTGGAGAATGCACACCTTGTTTAGAGCCATGGCTATTAATATTACAAAGGAGACTGAGGAAATTATGGTGAAACCAAGTAGGAATTTGGTACAATTACCGGAGAATGGAGGATGGAAAGAAAATCTGCAAAAAGTTTTCCTTACTGAAAGCAATGTACAGAAAATTCTAGATGGCACATCTCCCAAGTGCTCTAGACTCTCCACATTGCTTTTGGATTGCAATTATGATCTTAAATGGATTCCGGATGATTTTTTAAGCAACATGGTTGCTCTTGAAATACTTGATTTGTCTTGGACTGGCATCAAGCGTTTACCTGAATCTTTATCCAACTTGGATTGCCTCGTTGCTTTATTGCTATCTGGATGTACAGAATTGAGTTATGTGCCCTCATTAGCAAAGTTGCAAAGGTTAATAGAGTTGGACCTTTCACTGACTGCCATCACTGAAGCACCTGGTGGTTTGGAGTTGTTGGTCAATTTGAAATGTCTGAATCTAGCTGACACAGAACAGTTGAAAATGTCATCATCAGCAATATCCAAGATGATCAATTTACTCTCTCTTAAGTTGATGAACTGGATCCCAGATTCAATGAATGTGAGTGCACAAGATCTGCAGGGTTTGAGAAAGTTGAAAGTTATGTCAGTCAGCTTTGGTGATACTGGGGAGTTTAATACCTATGTTAAGAGCCTGGACAAAGATCATATGCCCAAAAGCTATTGTCTGAGTTCAGCTAGGCTGTATGATCGTGCTTGCTTTGAGGGTGCACTAGAAGAAAATATGAAAAGGGTTGTTTTATGTGGTATTAGTTTGAGGAACAAAACAGAGCTTCCAGAAGACGTCAAAGAGTTGATTATAAGTGGGTGTGACCGTGGGACAGAGAAAACATGCCTATGCTCTGCTTTATCATTATGTAAAAGTAATGATGATGTGGCTGAAATTGAATGGTTGAACATAAAGCGATGCCGTATGTGGCAGTCCATGGGTTGTGCCTCTCCCGATTGCTTGTTTTGCGGCCCTGTCCAATTGGTAAGACTTTCCCTTGAAGAGGTGGAAGACTTGGAACAAATACTGGCACCATCATCTGCTGCAGTCTTTTATAGCCCATTTCTTTACCTCAGAGATCTCTATATTTCTGGATGCAACAAAATGAAGATTCTGATTACACAGGAATTATTTGGACAGCTCAAAGAACTAGAGACCATTTTTGTTGAATATTGCGAGTCGATGGAAGAAATAGTTGAGGAGAATAGTGGTAGCATTGACCCTAACACTCTTCCTAAAGTGAGACGTGTGGAATTAATTGGTCTACCAGAATTACGTTCCGTATTCAGGGGAACCATGCACTGTCCTTCTCTCAAATATTTTGCCGCCTACCATTGTGAGAAACTAAGCATCCCCCCTCATATAGAGATCGTGCAAGGATATAAGCTTCACATGGAGAAGACCCCAACTAGATACTATTGGAAATGTGATGATCAGGTGAATATCTCCCCCAAAATTTGA 2388 0.3924 MNNEASTIGIWGMGGTGKTALATLVNNKLLEEAGDDFDHIIWVTMSQSDNRVYQLQKAIAGSINLDISDECDLKRISGKLLQASRHIKRCLLILDNVWDPIFLEEVGFPLSNDGIKLILTTRSWEVCQNMNCTKKTINIKPLDEEDSWDLFEKTLGIHQIQSSRVEPIARAMAKQCEGLPLAIITIARSMRGKEDYLREWNHMLEGMLEDMDERIFSALKSSYACLNNKLQRLFLYYALTAKENVRGSDVELLIRRFFSMGWTDETDSLEMQYDECYTMLHKLKNSSLLMEKNGRWRMHTLFRAMAINITKETEEIMVKPSRNLVQLPENGGWKENLQKVFLTESNVQKILDGTSPKCSRLSTLLLDCNYDLKWIPDDFLSNMVALEILDLSWTGIKRLPESLSNLDCLVALLLSGCTELSYVPSLAKLQRLIELDLSLTAITEAPGGLELLVNLKCLNLADTEQLKMSSSAISKMINLLSLKLMNWIPDSMNVSAQDLQGLRKLKVMSVSFGDTGEFNTYVKSLDKDHMPKSYCLSSARLYDRACFEGALEENMKRVVLCGISLRNKTELPEDVKELIISGCDRGTEKTCLCSALSLCKSNDDVAEIEWLNIKRCRMWQSMGCASPDCLFCGPVQLVRLSLEEVEDLEQILAPSSAAVFYSPFLYLRDLYISGCNKMKILITQELFGQLKELETIFVEYCESMEEIVEENSGSIDPNTLPKVRRVELIGLPELRSVFRGTMHCPSLKYFAAYHCEKLSIPPHIEIVQGYKLHMEKTPTRYYWKCDDQVNISPKI 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3879g00001 795 Gene3D - 1 139 IPR027417 -
Pral3879g00001 795 Gene3D Ribonuclease Inhibitor 346 771 IPR032675 -
Pral3879g00001 795 PRINTS Disease resistance protein signature 404 420 - -
Pral3879g00001 795 PRINTS Disease resistance protein signature 7 22 - -
Pral3879g00001 795 PRINTS Disease resistance protein signature 84 98 - -
Pral3879g00001 795 PRINTS Disease resistance protein signature 176 190 - -
Pral3879g00001 795 Pfam Leucine rich repeat 359 417 IPR001611 GO:0005515
Pral3879g00001 795 Pfam NB-ARC domain 6 223 IPR002182 GO:0043531
Pral3879g00001 795 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 4 760 - -
Pral3879g00001 795 SUPERFAMILY L domain-like 298 766 - -
Pral3879g00001 795 Gene3D - 141 227 IPR042197 -
Pral3879g00001 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 236 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3879g00001 Pral-Chr3879 18646 21033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3879g00001 8 583 WRKY Transcription Factor Family AT5G45050 22.997 1.14e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3879g00001 - K13459 pcin:129318814 526.168