Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3877g00001 ATGGCTGATATTGATTACCATACTAAAAAGCCACTGATCGATACAACTCCGACGTCGTCTCTGAAGCTCTTTGGCATTAACATTCACAAAGGTTCAGAATCTGATGAGGCCTTTAACTCCGGCAACGATCACCGGAAATACGAGTGCCAGTATTGTTGTCGTGAGTTTGCCAATTCACAAGCACTGGGAGGCCATCAAAATGCACACAAGAAAGAAAGACAGCTTCTGAAGCGAGCTCAAATGCAAGCTGCTCGTACTGCTTTTGCCGCTTCGCATCATACTTATATTCATCATCACAACCCAATCATATTTCCTCCACCTGATACCCTCACCGGATCGCCACCTCCGCCTCCGCCACGGCAGTCTCCGTGGCCGCACAGTGTGGCACAAAATCCACCACCTTCGGTGTATCATTCTGGGGAATTCGGTGTGTGTGTGAATTCTGGTTTTGCAGCAGGTTTGCATGATCCTTCACGATCATCATCTATGGCGGCATACGGCGGCTTTAATGGCGGCGATGGTGGCGAACGAGGCTTCAGTTTGGATTTGCAACTTAGTCTCTGA 564 0.4876 MADIDYHTKKPLIDTTPTSSLKLFGINIHKGSESDEAFNSGNDHRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARTAFAASHHTYIHHHNPIIFPPPDTLTGSPPPPPPRQSPWPHSVAQNPPPSVYHSGEFGVCVNSGFAAGLHDPSRSSSMAAYGGFNGGDGGERGFSLDLQLSL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3877g00001 187 ProSitePatterns Zinc finger C2H2 type domain signature. 49 69 IPR013087 -
Pral3877g00001 187 PANTHER ZINC FINGER PROTEIN 5 8 187 IPR044299 GO:0010090
Pral3877g00001 187 MobiDBLite consensus disorder prediction 103 133 - -
Pral3877g00001 187 Gene3D Classic Zinc Finger 26 100 - -
Pral3877g00001 187 ProSiteProfiles Zinc finger C2H2 type domain profile. 47 74 IPR013087 -
Pral3877g00001 187 SUPERFAMILY beta-beta-alpha zinc fingers 44 74 IPR036236 -
Pral3877g00001 187 MobiDBLite consensus disorder prediction 107 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3877g00001 Pral-Chr3877 2787 3934 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3877g00001 16 118 C2H2 Transcription Factor Family AT1G67030 58.929 2.04e-33 116