Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3876g00004 CTCCGGCAACGATCACCGGAATACGAGTGCCAGTATTGTTGTCGTGAGTTTGCCAATTCACAAGCACTGGGAGGCCATCAAAATGCACACAAGAAAGAAAGACAGCTTCTGAAGCGAGCTCAAATGCAAGCTGCTCGTACTGCTTTTGCCGCTTCGCATCATACTTATATTCATCATCACAACCCAATCATATTTCCTCCACCTGATACCCTCACCGGATCGCCACCTCCGCCTCCGCCACGGCAGTCTCCGTGGCCGCACAGTGTGGCACAAAATCCACCACCTTCGGTGTATCATTCTGGGGAATTCGGTGTGTGTGTGAATTCTGGTTTTGCAGCAGGTTTGCATGATCCTTCACGATCATCATCTATGGCGGCATACGGCGGCTTTAATGGCGGCGATGGTGGCGAACGAGGCTTCAGTTTGGATTTGCAACTTAGTCTCTGA 447 0.5101 LRQRSPEYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARTAFAASHHTYIHHHNPIIFPPPDTLTGSPPPPPPRQSPWPHSVAQNPPPSVYHSGEFGVCVNSGFAAGLHDPSRSSSMAAYGGFNGGDGGERGFSLDLQLSL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3876g00004 148 PANTHER ZINC FINGER PROTEIN 5 7 148 IPR044299 GO:0010090
Pral3876g00004 148 ProSitePatterns Zinc finger C2H2 type domain signature. 10 30 IPR013087 -
Pral3876g00004 148 ProSiteProfiles Zinc finger C2H2 type domain profile. 8 35 IPR013087 -
Pral3876g00004 148 MobiDBLite consensus disorder prediction 68 91 - -
Pral3876g00004 148 MobiDBLite consensus disorder prediction 60 96 - -
Pral3876g00004 148 SUPERFAMILY beta-beta-alpha zinc fingers 7 35 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3876g00004 Pral-Chr3876 49006 49747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3876g00004 5 79 C2H2 Transcription Factor Family AT1G67030 64.935 4.21e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3876g00004 - - pcin:129303084 164.466