Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3875g00003 ATGGCTGCTTGCGACAAGAAGAAGGTTGTGTTCATCATGGGATCAACTGGAACAGGAAAAACCAAGCTTTCAATCGACCTGGGCTCACATTTCCCCTCTCAAATCATCAATGCTGACAAGATCCAAGTGTACAAAGGTCTGGACATAATCACCAACAAGGTCCCGGAATCCGAGCGAAGAGGAATCCCACATCACCTCCTGGGAATCATCGAAGATCCCGAATTCGACTACTCTCCCACCCTTTTCTGCGACCATGTCATCTCTGCGATCGAACACATCACCCAACAAGGACACCTTCCCATCATCGTCGGAGGCTCCAACACTTACCTAGAATACCTTGTGGAAGATCCCACCTTGGACTTTCGTTCCAAACATGATTGTTGCTTCCTCTGGCTCGACGTGTCTCTTGATGTCCTCTTTCCCTATCTGGACAAAAGGGTCGATGAAATGGCGGACGCAGGGTTTGTGGATGAGACCAGAGAATACTTCCTTCCTGAGGCTGATTATTCTGCTGGAATAAGAAGAGCCATCGGCGCTCCTGAACTGCACGAGTATTTTAAGGTTGAGAACGATGTTAATGTGGACGATGAAACCAAACAAGAGTTGCTCAGAGATGCCATGCAGAGAATGAAAGAGAACACTCATACGCTGGCTAGAGTGCAACTTTCAAAGATACAACGCATCAATGATGAGCGTTCTTGGGGATTGAATCGTATTGATGCTACTGAGGTATTTGAGGCTGTTCTGAATGGAAGTGCGTATCAGACTTTATGGAAAGATTTGGTTTTCAATCCCAGCAAACAGATTGTTCAGAGCTTCCTTGAAGCCTATATGAGTGAGAGCAAAGCTGCAGAATAA 858 0.4627 MAACDKKKVVFIMGSTGTGKTKLSIDLGSHFPSQIINADKIQVYKGLDIITNKVPESERRGIPHHLLGIIEDPEFDYSPTLFCDHVISAIEHITQQGHLPIIVGGSNTYLEYLVEDPTLDFRSKHDCCFLWLDVSLDVLFPYLDKRVDEMADAGFVDETREYFLPEADYSAGIRRAIGAPELHEYFKVENDVNVDDETKQELLRDAMQRMKENTHTLARVQLSKIQRINDERSWGLNRIDATEVFEAVLNGSAYQTLWKDLVFNPSKQIVQSFLEAYMSESKAAE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3875g00003 285 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 6 274 IPR039657 -
Pral3875g00003 285 FunFam Adenylate isopentenyltransferase 5, chloroplastic 136 236 - -
Pral3875g00003 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 194 IPR027417 -
Pral3875g00003 285 Gene3D - 6 274 IPR027417 -
Pral3875g00003 285 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 136 236 - -
Pral3875g00003 285 Pfam IPP transferase 42 116 - -
Pral3875g00003 285 Pfam IPP transferase 123 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3875g00003 Pral-Chr3875 30658 31515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3875g00003 123 276 C2H2 Transcription Factor Family AT2G27760 30.726 6.53e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3875g00003 K10760 - gmx:100817288 362.073