Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3875g00001 ATGGCTGCTTGCGACAAGAAGGTTGTGTTCATCATGGGATCAACTGGAACAGGAAAAACAAAGCTTTCGATCGACCTGGGCTCACATTTCCCCTCTCAAATCATCAACGCTGACAAGATCCAAGTGTACAAAGGTCTGGACATAATCACCAACAAGGTCCCGGAATCCGAGCGAAGAGGAATCCCACATCACCTCCTGGGAATCATCGAAGATCCCGAATTCGACTACTCTCCCACCCTTTTCTGCGACCATGTCATCTCTGCGATCGAACACATCACCCAACAAGGACACCTTCCCATCATCGTCGGAGGCTCCAACACTTACCTAGAATACCTTGTGGAAGATCCCACCTTGGACTTTCGTTCCAAACATGATTGTTGCTTCCTCTGGCTCGACGTGTCTCTTGATGTCCTCTTTCCCTATCTGGACAAAAGGGTCGATGAAATGGCGGACGCAGGGTTTGTGGATGAGACCAGAGAATACTTCCTTCCTGAGGCTGATTATTCTGCTGGAATCAGAAGAGCCATCGGCGCTCCTGAACTGCACGAGTATTTTAAGGTTGAGAACGATGTTAATGTGGACGATGAAACCAAACAAGAGTTTCTCAGAGATGCTATGCAGAGAATGAAAGAGAACACTCATACGCTGGCTCGAGTGCAACTTTCAAAGATACAACGCATCAATGATGAGCTTGCTTGGGGATTGAATCGTATTGATGCTACTGAGGTATTTGAGGCTGTCCTGAATGGAAGTGCGTATAAGTGTTTATGGGAAGATCTGGTTTTTAATCCCAGCAAGCAGATTGTCCAGAGCTTCCTCGAACATAAAGCTGCTGCCGAATAA 843 0.4698 MAACDKKVVFIMGSTGTGKTKLSIDLGSHFPSQIINADKIQVYKGLDIITNKVPESERRGIPHHLLGIIEDPEFDYSPTLFCDHVISAIEHITQQGHLPIIVGGSNTYLEYLVEDPTLDFRSKHDCCFLWLDVSLDVLFPYLDKRVDEMADAGFVDETREYFLPEADYSAGIRRAIGAPELHEYFKVENDVNVDDETKQEFLRDAMQRMKENTHTLARVQLSKIQRINDELAWGLNRIDATEVFEAVLNGSAYKCLWEDLVFNPSKQIVQSFLEHKAAAE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3875g00001 280 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 135 235 - -
Pral3875g00001 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 191 IPR027417 -
Pral3875g00001 280 Gene3D - 6 273 IPR027417 -
Pral3875g00001 280 FunFam Adenylate isopentenyltransferase 5, chloroplastic 135 235 - -
Pral3875g00001 280 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 6 273 IPR039657 -
Pral3875g00001 280 Pfam IPP transferase 41 115 - -
Pral3875g00001 280 Pfam IPP transferase 122 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3875g00001 Pral-Chr3875 18435 19277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3875g00001 122 274 C2H2 Transcription Factor Family AT2G27760 30.899 2.50e-18 82.4