Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3874g00016 ATGTCCACCAAAGGCTCCGTCGGTATTGATTACAGACGCAAGTCAGTGTACACTCATTCCGAGTCCGTCGTCAAACCCCAGGCCGCCATGTCCCCCAAGAAACGAGAAAGCTCTCACCAGAACGCCACAACCACAAATGGCAAAGTTATTCCTTTTATTCCTCGCAACCTTGTTGAACAACTTCCGCTCAACCTGGACGCCCAAACCCTAATTCCATCATCTCCGGTCCAGATTTCTTTGAGAGGTTGCAGTGAGAATTGCAGTATAAGGCCGTGTTTGCAGTGGATTAAAAGCCCTGAGTCTCAGGCGAATGCTACTGTGTTTCTCGCCAAGTTCTACGGCCGAGCTGGGCTCATGAACCTCATCAACGCCGGTCCTGAACACCTTCGTCCTGCGATTTTTCGGTCTTTGCTTTACGAGGCATGCGGGCGGATAGTTAATCCGATTTATGGGTCCGTCGGTTTGTTATGGTCCGGGAGCTGGCAGCTGTGTCAGGCCGCCGTGGAAGCTGTCTTGAAGGGCGCTCCAATCACGCCGATCACCTCCGAGGCGGCCACCAACGGGAGGGGCCCACCTCTCAAGGCTTACGACATACGCCATGTGTCCAAAGACGAGGCGAACTTGGCCGCGTCAAGCGATGCTCAACGAGTCGTCAAGAGTCGCACGAGGTTCAAGCGCTCCGTCGGCGGCGTCAAGCCGAAAGCCAACGACAAAGCAGAGACCGGCTCGTTAACCGTTAAGCCTGCTCCGCCAGCACCCGACGCTCCAATCAATTCCTGGACCGGTTGTTGTGCTGCTAAACCGGCTGTGAACCGATCGGGAAGCCACGAGTCATCGCTGAGCCACCAGTCGGAGGCAGTTAACGAGAGCAAAGAAAGCGAGAGCATGATCTCCGTGGAGACCGCCGAGACGTCGATCCTCTTCCGAGACGAGCCGGAATTCACCGGCAAGGCCAGCGGACGAACCGTCGAGGAAACAACCGATGTAGGCCTAGAGTTAACACTAGGATTCGAACCGACATCGCCTGCGAACCGCGTGGTACCGGTGAAGAAGAGGAAGATCGAGTTCAAGGATAGTGGGAACTGGTCATCGTGCAAAATGGACCTGGGACTTGAGTTATCGGGTTGA 1128 0.5532 MSTKGSVGIDYRRKSVYTHSESVVKPQAAMSPKKRESSHQNATTTNGKVIPFIPRNLVEQLPLNLDAQTLIPSSPVQISLRGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATNGRGPPLKAYDIRHVSKDEANLAASSDAQRVVKSRTRFKRSVGGVKPKANDKAETGSLTVKPAPPAPDAPINSWTGCCAAKPAVNRSGSHESSLSHQSEAVNESKESESMISVETAETSILFRDEPEFTGKASGRTVEETTDVGLELTLGFEPTSPANRVVPVKKRKIEFKDSGNWSSCKMDLGLELSG 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3874g00016 375 MobiDBLite consensus disorder prediction 22 45 - -
Pral3874g00016 375 MobiDBLite consensus disorder prediction 269 298 - -
Pral3874g00016 375 MobiDBLite consensus disorder prediction 272 298 - -
Pral3874g00016 375 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 81 335 - -
Pral3874g00016 375 ProSiteProfiles LOB domain profile. 71 177 IPR004883 -
Pral3874g00016 375 MobiDBLite consensus disorder prediction 225 253 - -
Pral3874g00016 375 Pfam Lateral organ boundaries (LOB) domain 81 171 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3874g00016 Pral-Chr3874 119282 155113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3874g00016 81 371 AS2 family AT3G02550 52.027 2.86e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral3874g00016 LOB 3.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3874g00016 - - qsa:O6P43_005610 396.741