Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3873g00002 ATGGAACCACTCATCACCTCCACCTCCGCCGCCGTCACCACCACTCCGCCAACCTACCGTGGTGTTCGCATGCGAAAGTGGGGCAAATGGGTGTCCGAAGTCCGGGAGCCCGGCAAGAAGACCCGGATATGGTTAGGGAGCTATGACACGCCAGAGATGGCTGCAGCTGCATACGATGTCGCAGCTTTACATTTTCGTGGCCAAGCCGCACGGCTCAACTTCCCGGAGCTCATCGGCAGCCTGCCCCGGCCGGCAAGCTCCCGAGCTGAGGATGTGCGGTTGGCAGCACAGCAAGCAGCATTGAACCTAGAGAGAGTGGTGATCAGAGGGCCGTCGGAGGCAAGCCACGGCACTACGTCTACAGTGGAGGCGGCGCCAGTGACGGTGGGGCTATCGCCGAGCCAAATTCAGGCTATAAATGAGTCGCCATTGGATTCACCAAAGATGTGGATGCAGATGGCTGCTGAAGCTGCTCCTTTGCTAGGATTTGATGTATTACCGTCTAATGATGAGGACGACGGCCAAGAAGCATTAAGGTTGAGTGAACCAGAAGAAACGCAGCATTATGAATCAATATGGGAATTTTAA 588 0.5578 MEPLITSTSAAVTTTPPTYRGVRMRKWGKWVSEVREPGKKTRIWLGSYDTPEMAAAAYDVAALHFRGQAARLNFPELIGSLPRPASSRAEDVRLAAQQAALNLERVVIRGPSEASHGTTSTVEAAPVTVGLSPSQIQAINESPLDSPKMWMQMAAEAAPLLGFDVLPSNDEDDGQEALRLSEPEETQHYESIWEF 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3873g00002 195 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 149 - -
Pral3873g00002 195 FunFam Ethylene-responsive transcription factor 2 18 76 - -
Pral3873g00002 195 Pfam AP2 domain 17 67 IPR001471 GO:0003700|GO:0006355
Pral3873g00002 195 SUPERFAMILY DNA-binding domain 18 76 IPR016177 GO:0003677
Pral3873g00002 195 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Pral3873g00002 195 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Pral3873g00002 195 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Pral3873g00002 195 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Pral3873g00002 195 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Pral3873g00002 195 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3873g00002 Pral-Chr3873 13904 14491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3873g00002 16 152 AP2-EREBP Transcription Factor Family AT1G71450 59.124 3.41e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral3873g00002 AP2 9.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3873g00002 - - zju:107421431 217.238