Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3871g00001 ATGGCTACTAAGCAAACCGATATGGTTAAGCCTTCTTCTCTTCAGGTTGAGCCTGCTACCTCTCCACCGGAGGCCAGTCCTTTCCGGAAGATCGTCGTCGTTGCTTCCATTGCCGCCGGGATTCAATTCGGATGGGCTCTTCAGCTCTCCTTGCTGACTCCTTATGTCCAGCTTCTCGGTATTCCCCACACCTGGGCTGCTTTCATCTGGCTCTGTGGTCCCATCTCCGGTATGATAGTTCAACCGGTCGTTGGATACCACAGTGACCGCTGCACCTCCCGATTCGGCCGACGCCGGCCGTTTATCGCCGCCGGTGCATTGGCCGTCGTCGTCGCTGTTTTCTTGATCGGTTACGCTGCGGACATGGGCCACATGTTCGGTGACTCGTTGGAGAAGAAAGCGCGTCCCCGAGCCATCGCGATCTTCGTCGTCGGATTCTGGATCCTCGACGTGGCCAATAACATGCTACAAGGCCCATGCCGAGCACTGTTAGCCGACCTCGCCGCCGGCGACCAGAGGAAGACTCGGACGGCGAACGCGTTCTTCTCGTTCTTCATGGCCGTCGGGAGCGTCCTCGGATACGCCGCCGGATCCTACAGTAAGCTCCACAACGTATTTCCGTTCACGAAAACCAAGGCCTGCGACGAATATTGCGCGAACCTGAAGAGTTGCTTCTTCCTCTCCATCGCTCTTCTGCTCACTGTCTCAATCGCTGCTGTGACCTACGTGAAGGAGAAGGCGCTTGAGAAAGGAACTGGCGGGAACGAGGGAGAAAATGATTCGGTGGGCGAGGGATCAGGAGGATTCCAGTGCTTCGGACAAATGTTCGGTGCGTTCCGTGAGCTCAAGAAGCCGATGTGGATTTTACTCCTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCTTTCTTGTTGTTCGACACTGATTGGATGGGCAAGGAGGTGTACGGAGGAAAGGCTGGGGAAGGCAAGGCATACGATAGAGGGGTGCGCGCTGGCGCATTGGGTCTTATGCTCAACTCCGTGGTGTTAGGCGTGGTGTCGTTGGGCGTGGAGGTGCTGGCGCGTGCGGTTGGGGGCCCGAAGAGGTTATGGGGAATTGTTAACTTCATTCTCGCCGTATGTTTGGCCTTGACGGTGTTGGTCACCAAGTTGGCCGAGCACTCACGGCAGTTCGCCCCCGGCTCTCAGGATCCTCTGCCACCTTCCACCGGGATCAAGGCCGGCGCGTTAACTCTCTTCGCGGTTCTCGGAATTCCACTCGCGATTACTTACAGTATCCCTTTTGCGCTAGCATCCATATTCTCCACCTCTTCAGGGGCAGGCCAAGGGTTGTCTTTGGGCGTTCTCAATCTGGCAATTGTGATCCCACAGATGTTTGTGTCTGTGGTGAGTGGACCGTGGGACGCAGCGTTCGGTGGTGGTAACCTACCGGCGTTTGTTGTAGGTGCCATCTCTGCCGCAATCAGCGGCATATTGTCGATGGTTTTGTTGCCGTCTCCACCACCGGACTTGGCAAAGACGATGAGCACAGCCGGAGGCTTCCATTAG 1551 0.5648 MATKQTDMVKPSSLQVEPATSPPEASPFRKIVVVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMIVQPVVGYHSDRCTSRFGRRRPFIAAGALAVVVAVFLIGYAADMGHMFGDSLEKKARPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANAFFSFFMAVGSVLGYAAGSYSKLHNVFPFTKTKACDEYCANLKSCFFLSIALLLTVSIAAVTYVKEKALEKGTGGNEGENDSVGEGSGGFQCFGQMFGAFRELKKPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGKAGEGKAYDRGVRAGALGLMLNSVVLGVVSLGVEVLARAVGGPKRLWGIVNFILAVCLALTVLVTKLAEHSRQFAPGSQDPLPPSTGIKAGALTLFAVLGIPLAITYSIPFALASIFSTSSGAGQGLSLGVLNLAIVIPQMFVSVVSGPWDAAFGGGNLPAFVVGAISAAISGILSMVLLPSPPPDLAKTMSTAGGFH 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3871g00001 516 Pfam MFS/sugar transport protein 40 252 - -
Pral3871g00001 516 MobiDBLite consensus disorder prediction 1 20 - -
Pral3871g00001 516 CDD MFS_SLC45_SUC 31 493 - -
Pral3871g00001 516 SUPERFAMILY MFS general substrate transporter 30 502 IPR036259 -
Pral3871g00001 516 Gene3D MFS general substrate transporter like domains 26 507 IPR036259 -
Pral3871g00001 516 FunFam Sucrose transport protein 25 498 - -
Pral3871g00001 516 PANTHER SUGAR TRANSPORTER 27 497 - -
Pral3871g00001 516 MobiDBLite consensus disorder prediction 1 24 - -
Pral3871g00001 516 NCBIfam sucrose/proton symporter 27 503 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3871g00001 Pral-Chr3871 12025 14987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3871g00001 1 516 Sucrose Transporter Gene Family AT1G71890 66.985 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3871g00001 K15378 - gmx:547679 801.971