Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3870g00024 ATGGAAGATCCAGAGGAAGAAGAGCTTCTGAATCTCAGCCTCTCAGTTTCTGCAGGTAGATCAGAGAGGAAAAAGAAAGGAAAGATGATGATGATGAGTACTAGAGATCATCATCTTCATCATCACCACCACAATTCCTTCTCCTCCTATGAACAAGGCTTGGAAGGGAAGATCTTTAGGTTGCTTCAAACCAGAGATCTAATGCTTCGTCAAGATCAAAACCTCATGAGAAATCGAAGAGGAGTTCTAGAAGATGGCAATGGCCTCCCTCTGATTCACCTTCTCCTGAGTACAGCCACTTGTGTTGATGACACCAACATTAACTCTGCCCTAGACAACCTCACCCAGCTTTACCAAACTGTCTCTCTCACCGGCGACTCCGTCCAACGCGTCGTCGCTTACTTCGCCGACGGCCTCGCTGCTCGGCTCCTCACCCGGAAATCCCCCTTCTACGACGTGCTGATGGATGAACCCACAAGTGAAGAAGAGTTCTTAGCCTTCACCGACCTTTATAGAGTCTCACCGTACTACCAATTCGCTCACTTCACAGCCAACCAAGCCATCCTTGAAGCCTTCGAGAACGAGGAAGACAAGAACAACCGAGCATTACATGTCATCGACTTCGATGTCTCCTATGGTTTTCAATGGCCTTCTCTGATACAATCCCTCTCCGAGAAAGCCACCAGCGGCAACAGAATATCTCTGAGAATCACAGGCTTCGGGAAGAACCTCAAAGAGCTTCAAGAAACGGAATCTCGTTTGATCAGCTTCTCAAAGGGATTCACCAATCTGGTGTTTGAATTCCAAGGCTTGCTTCGAGGCTCACGTGTGATTAACCTAAGGAAGAAAAAGAATGAAACAGTGGGTGTGAATTTGGTCTCTTATTTGAACACATTGAGTAGCTTCATGAAGATTTCTGACACATTGGGATTTGTTCATTCCCTCAACCCCTCCATTGTTGTGCTTGTGGAGCAAGAAGGAAGTAGAAGCCCCAGGACGTTCTTGTCGAGATTCACTGATTCATTGCACTACTTCGCCGCCATGTTCGATTCTCTTGATGATTGCTTACCTATGGACAGCACAGAGAGGCTGAGGATAGAGAAGAAGCTTCTGGGAAAAGAGATCAAGACCATGTTGAATTACTACGACGTGGACGGCTCGGATTGTCCCAAGTACGAGAGGATGGAAACATGGAAGGCGAGGATGGAGAGCCATGGCTTCAGCGGAACAAAAGTGAGCTCAAAAGCTTTGATTCAAGCGAAGCTACTTCTGAAGATGAGGACGCATTATTCTCCACTTCAGTTTGAAGACGACGGAGGAGGAGGAGGAGGAGGCGGTGGGGGTTTCAGGGTTTCAGAGAGAGACGACGGAAGAGCCATATCTTTGGGATGGCAAAATAGGTTTCTTCTTACAGTCTCGGCATGGCAGACAGTGCTGTGA 1440 0.475 MEDPEEEELLNLSLSVSAGRSERKKKGKMMMMSTRDHHLHHHHHNSFSSYEQGLEGKIFRLLQTRDLMLRQDQNLMRNRRGVLEDGNGLPLIHLLLSTATCVDDTNINSALDNLTQLYQTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDVLMDEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEDKNNRALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGKNLKELQETESRLISFSKGFTNLVFEFQGLLRGSRVINLRKKKNETVGVNLVSYLNTLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPMDSTERLRIEKKLLGKEIKTMLNYYDVDGSDCPKYERMETWKARMESHGFSGTKVSSKALIQAKLLLKMRTHYSPLQFEDDGGGGGGGGGGFRVSERDDGRAISLGWQNRFLLTVSAWQTVL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3870g00024 479 MobiDBLite consensus disorder prediction 1 31 - -
Pral3870g00024 479 Pfam GRAS domain family 91 476 IPR005202 -
Pral3870g00024 479 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 74 471 IPR005202 -
Pral3870g00024 479 ProSiteProfiles GRAS family profile. 82 476 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3870g00024 Pral-Chr3870 168968 170407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3870g00024 45 476 GRAS Transcription Factor Family AT1G14920 33.038 6.13e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral3870g00024 GRAS 1.1e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3870g00024 - - gmx:100809458 734.947