Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3870g00022 ATGGTTGCGAGTGCTGAGAACAACAACGTTGCTTTTCTCGAAGCAATGTGGCTGTCAAGTGGTCAGGTTTATCCAGCAGTTTTGAATGCTGCGATTGAGCTAAACCTGTTCGAAATCATTGGACGAGGAAACCCTAACGGCATGTCGCCCTCAGAAATTGCTTCTCAGCTTCCAACTCATGATCAACACCCAGACACTCCCCAGAGACTCGATCGCATGTTGTTTTTTCTGGCAAGCCATTCGCTTCTCAGCTGGTCGAAGCGATTTGATGAAGAAGAAGAAGACGAGAGATTGTATAGTCTCTCTCCCACTGGTCGATACTTAATCTCCAACGATGATGGAGCTTCCTTTGCTTCACTCTCAAAACTCTGTTGTCATCCTGCTTATATCTCAGTCTGGCAAAATTTCAAGCAAGTGATCGAGGTGGATGAGGAGGACTTGTTTAAGAAGGTGCATGGGATGTCTATGTTTGAGTACATGGAAACAGATCCAACGTTCAAACCTTTGTTTCACAGAGCAATGGCGGATATTTCTGCGATGCATATGAGGAAGATTCTGGAAACATACAATGGTTTTGAGGGCATATCAACTCTTGTTGATGTTGCCGGTGGCATTGGTCAAAGCCTCAAAATGATCACTTCCAAATACCCTTCAATTAAAGGCATCAACTTTGACTTGCCCCAAGTGGTCCAACATGCCCCCTCCTACCCAGGAGTTACGCATGTTGGGGGAGATATGTTCAAAAGTGTCCCAGAAGGCGATGCAATAATGATCAAGGCTGCGACACATAACTGGAGTGATGAGAAGTGCGTAGAAGTTCTGAAGAACTGCCACAAATCAGTGAAGAAAGGAGGGAAAGTGATATTGATGGACTTGATAATGCCAGAAATCCCAAAGGCAAGTGATGGTGATAAGTATGTGACCATTCTTGACAATGTCATGTTTCTGCAAGCTGGTGGAAAGGAAAGAACTGAGAGAGAATTTGCAGATCTGTGTAAAAGTGCTGGCTTCTCTGGTTACCAGATTGCTGCTTGTGTCTTCTCTACTCTGGGAGTCATTGAGTTCTACAAATAA 1074 0.4441 MVASAENNNVAFLEAMWLSSGQVYPAVLNAAIELNLFEIIGRGNPNGMSPSEIASQLPTHDQHPDTPQRLDRMLFFLASHSLLSWSKRFDEEEEDERLYSLSPTGRYLISNDDGASFASLSKLCCHPAYISVWQNFKQVIEVDEEDLFKKVHGMSMFEYMETDPTFKPLFHRAMADISAMHMRKILETYNGFEGISTLVDVAGGIGQSLKMITSKYPSIKGINFDLPQVVQHAPSYPGVTHVGGDMFKSVPEGDAIMIKAATHNWSDEKCVEVLKNCHKSVKKGGKVILMDLIMPEIPKASDGDKYVTILDNVMFLQAGGKERTEREFADLCKSAGFSGYQIAACVFSTLGVIEFYK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3870g00022 357 Pfam O-methyltransferase domain 133 338 IPR001077 GO:0008171
Pral3870g00022 357 Gene3D Vaccinia Virus protein VP39 109 357 IPR029063 -
Pral3870g00022 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 355 IPR029063 -
Pral3870g00022 357 Gene3D - 1 108 IPR036388 -
Pral3870g00022 357 CDD AdoMet_MTases 197 294 - -
Pral3870g00022 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Pral3870g00022 357 PANTHER O-METHYLTRANSFERASE 15 344 IPR016461 GO:0008168
Pral3870g00022 357 FunFam Caffeic acid 3-O-methyltransferase 1 108 - -
Pral3870g00022 357 Pfam Dimerisation domain 27 78 IPR012967 GO:0046983
Pral3870g00022 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 357 IPR016461 GO:0008168
Pral3870g00022 357 SUPERFAMILY "Winged helix" DNA-binding domain 11 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3870g00022 Pral-Chr3870 132817 135023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3870g00022 11 357 Monolignol Biosynthesis Gene Families AT5G54160 48.851 2.59e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3870g00022 - - qsu:112031144 419.083