Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3870g00021 ATGAACTCCATTGAGATGAACCACCAACATGTGATTAAATCCCTCTCTAATGACCAAGATGCTTGTCTTCAAGCCATGATTCTAAGTGCTGGTCAGGTAAACGCCGCCGTTTTGAACGCTGCCCTTCAGCTTAACCTCTTCGACATCATTTCAGAATCAAAAGGAGACGTCGACGATGGTTATGTTTCGCCCACTGAGATCGCTTCCAGACTCACCTCCCAGAAGAGCAAGATCGCCATAATCTCCGGCAGGCTCGACCGGATGCTCCGCTTGCTGGTGGCTCACTCCCTTCTCACCTGCTCCGTCAGAACCTCCGTCGACGGCACCACCCAGAGGCTCTACGCCCTCTCTCCCACCGGCCAATACTTCGTCTCCAAACAAGACGGCGCTTCCTGGGCTTCCCTGATGCCCGGCATATCCTATCATCCTCACATGTCACAGGTTTTTCTGAACTTGAGGGAAGGGGTGCTCAAGCTGAATGAGGGAGAAGACCTGAGCAAGATAGTTCATGGGACAAGTGTGTACGAGTACATGGAAATGGATCCTGCACTGAAACTGAAGTTCCAGAGAACAATGGCGGATCAGTCTGCTTTACATATGGAGAAGATTCTGGCGATATATAAAGGCTTTGAGGGTTCATCTTCTCTGGTTGATGTGGCTGGTGGTATTGGCCAATCCCTTAATATGATCATATCCAAGTACCCTTCCATTAACGGCATTAACTTTGATTTGCCCCATGTCATTGAGGATGCCCCTACCTATCCAGGAATAAAGCATGTTGGAGGAGACATGTTCAGAAGTGTTCCAAGTGCTGATGCTATAATGATAAAGGGCACAACACATAACTGGTCAGATGAAAAGTGTGTGAAGATATTTAGGAACTGCCATGAGGTATTGGATAAAGGAGGGAAAGTGATAGTGATAGACTTAATAATGCAAGAGGAACCAGAAATAAGCAGTGCTGCGAAGAATGTGGCCATTGCTGATATAGTAATGTTCTCTCAAGGAGGAGGACTTGAAAGAACTGAGAAACAGTTTGAAGCCTTGTGCAAGAGATCTGGCTTTTCTGGGTTCCGACTTGCTGCTCGTGTCCTCTCCATTGTAGGCGTTATGGAGTTTTACAAGCATTAG 1131 0.4721 MNSIEMNHQHVIKSLSNDQDACLQAMILSAGQVNAAVLNAALQLNLFDIISESKGDVDDGYVSPTEIASRLTSQKSKIAIISGRLDRMLRLLVAHSLLTCSVRTSVDGTTQRLYALSPTGQYFVSKQDGASWASLMPGISYHPHMSQVFLNLREGVLKLNEGEDLSKIVHGTSVYEYMEMDPALKLKFQRTMADQSALHMEKILAIYKGFEGSSSLVDVAGGIGQSLNMIISKYPSINGINFDLPHVIEDAPTYPGIKHVGGDMFRSVPSADAIMIKGTTHNWSDEKCVKIFRNCHEVLDKGGKVIVIDLIMQEEPEISSAAKNVAIADIVMFSQGGGLERTEKQFEALCKRSGFSGFRLAARVLSIVGVMEFYKH 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3870g00021 376 Gene3D Vaccinia Virus protein VP39 125 375 IPR029063 -
Pral3870g00021 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 375 IPR016461 GO:0008168
Pral3870g00021 376 Gene3D - 1 123 IPR036388 -
Pral3870g00021 376 FunFam Caffeic acid 3-O-methyltransferase 3 123 - -
Pral3870g00021 376 SUPERFAMILY "Winged helix" DNA-binding domain 17 127 IPR036390 -
Pral3870g00021 376 PANTHER O-METHYLTRANSFERASE 25 373 IPR016461 GO:0008168
Pral3870g00021 376 Pfam O-methyltransferase domain 164 356 IPR001077 GO:0008171
Pral3870g00021 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 141 360 IPR029063 -
Pral3870g00021 376 PIRSF O-mtase 2 375 IPR016461 GO:0008168
Pral3870g00021 376 Pfam Dimerisation domain 37 93 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3870g00021 Pral-Chr3870 124507 126534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3870g00021 17 375 Monolignol Biosynthesis Gene Families AT5G54160 43.611 2.45e-97 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3870g00021 - - cave:132184044 376.711