Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3869g00003 ATGCCAACACCACCACCAACCGCACCGTTTGGTGCTCCAGAAACTCCCAATGCACGCTCCTCATCCTCTCCTCCTTTATTATCTTCCTCTTATCCTATCACTCTCAAGTTCGTGGACGTGGGATACAGAGTAAAGGTTGATAGAAAGAAAGGAGGGAGCAACATAAAGCGAATGATCTCGTCGCTTTCCGACGGGGGAACGACGGCGCAAGAGAAAATCATTCTGAACGGCGTGACGGGGATGGTTTGTCCGGGAGAAATCCTGGCGGTTCTCGGCCCTTCGGGGAGCGGGAAATCGACCCTCCTAAACGCACTAGCCGGGAGACTCGTCCAAGGGCAGGGCCTCACCGGAACAATCCACGCGAACGGATGCAAACTGAGCAAATCGATTCTCCGGCGAACTGGATTCGTGACTCAAGACGACGTGCTTTATCCTCATCTCACCGTCCGAGAGACCCTTATCTTCTGCGCACTTCTTCGTCTTCCCAGAACACTCTCGAAAGAAGAGAAGATATCGATGTGCGAGTCGGTGATTAGAGAGCTGGGGCTGGGGAAATGCGAGAACACGATCATCGGAAACGCGTATATTCGAGGGGTATCAGGAGGAGAGAGGAAGAGGGTGAGTATAGGGCATGAGATGTTGATGAATCCGAGCTTGTTGATACTGGACGAGCCAACTTCCGGGTTGGACTCGACGGCGGCGCACAGGCTGGTGACGACGCTGACGACGGTGGTGGCGCAGCAGAAGGGGAAGACGGTGGTGGCGTCGATGCACCAACCGTCGAGCAGGGTGTTTCAGATGTTCGATAAGATTTTGGTGTTATCGGAGGGACAGTGTTTGTACTTCGGAAAGGGAAGCGAAGCCATGAGCTACTTCGAGTCGCTCGGATTCAAGCCGTCTTTTCCCATGAACCCCGCCGACTTTCTGCTTGATCTCGCTAACGGTGTTTGTCAGGTTGATAGTGCTGTAAGTGAAAGAGACAGGCCAAATATGAAGCAAACCCTAGTCAACTCTTACAACGCAATTCTAGCTCCCAAGGTGAAAGAAGCAATATTAAACCACACGGACACTTGTACAAAACAAACTCATCATCGTCATCATCATCAAACCCTAGAAATCACCAATTCCAAGGAAGGAAGATACAGTAAATTCAAGAACGTGAACACGACGATCTCCCTCTCTAACTGGTTTAACCAGTTCAGTGTCCTCCTCCACAGAAGCCTCAAAGAACGAAAGCATGAATCCTTTAACCCTCTCAGAGTCTTCCAGGTTCTCGCCGCCGCCTTGCTCGCCGGCCTCATGTGGTGGCACTCCGATTACCGGGATGTCCAAGACCGTCTCGGCCTCCTTTTCTTCATCTCCATTTTCTGGGGTGTCTTCCCTTCCTTCAACTCCGTCTTCGCCTTCCCACAAGACCGTGCCATCTTCCTCAAGGAACGAGCCTCCGGTATGTATACCCTCTCGTCTTACTTCACCGCCCGGATCGTCGGCGATCTCCCCATGGAACTCCTCCTTCCCTTCATCTTCCTCACCGTCACCTACTGGATGAGCGGTCTCCGGCCAGACCTATGGGCTTTTCTACTAACACTACTAGTCGTTCTCTTCTACGTGCTTGTCTCTCAGGGGCTGGGACTGTTCCTCGGCGCCGCCATAATGGACGCCAAGCAGGCCTCCACGGTAGCCGCGGTGGTGATGCTAGGGTTTGTGTTGATCGGTGGGTATTACGTTCACAAAGTGCCTTTGTGCTTGGGGTGGCTCAAGTATGTGTCGGTTACTTTTTACTGTTACAGGCTTCTGATTTATATTCAGTATGGTGACGGGAAGAGAATCTCAGAGTTTCTGGGTTGCTTCAACAATGGCGGAATCGAAGACAGAGGACACTGTAAGTTTGTGGAACAAGACGTGGTGGGTCAGATAAGCCCTTCGATAAGCATTGGGGCTTTGGTTATGATGTTTTTGGGTTATAGAATGTTGGCTTATCTGGCACTGAGGAAGATCAAGACCTGA 2007 0.5152 MPTPPPTAPFGAPETPNARSSSSPPLLSSSYPITLKFVDVGYRVKVDRKKGGSNIKRMISSLSDGGTTAQEKIILNGVTGMVCPGEILAVLGPSGSGKSTLLNALAGRLVQGQGLTGTIHANGCKLSKSILRRTGFVTQDDVLYPHLTVRETLIFCALLRLPRTLSKEEKISMCESVIRELGLGKCENTIIGNAYIRGVSGGERKRVSIGHEMLMNPSLLILDEPTSGLDSTAAHRLVTTLTTVVAQQKGKTVVASMHQPSSRVFQMFDKILVLSEGQCLYFGKGSEAMSYFESLGFKPSFPMNPADFLLDLANGVCQVDSAVSERDRPNMKQTLVNSYNAILAPKVKEAILNHTDTCTKQTHHRHHHQTLEITNSKEGRYSKFKNVNTTISLSNWFNQFSVLLHRSLKERKHESFNPLRVFQVLAAALLAGLMWWHSDYRDVQDRLGLLFFISIFWGVFPSFNSVFAFPQDRAIFLKERASGMYTLSSYFTARIVGDLPMELLLPFIFLTVTYWMSGLRPDLWAFLLTLLVVLFYVLVSQGLGLFLGAAIMDAKQASTVAAVVMLGFVLIGGYYVHKVPLCLGWLKYVSVTFYCYRLLIYIQYGDGKRISEFLGCFNNGGIEDRGHCKFVEQDVVGQISPSISIGALVMMFLGYRMLAYLALRKIKT 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3869g00003 668 CDD ABCG_EPDR 59 283 - -
Pral3869g00003 668 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Pral3869g00003 668 Gene3D - 61 295 IPR027417 -
Pral3869g00003 668 MobiDBLite consensus disorder prediction 1 27 - -
Pral3869g00003 668 Pfam ABC transporter 75 227 IPR003439 GO:0005524
Pral3869g00003 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 294 IPR027417 -
Pral3869g00003 668 FunFam ABC transporter G family member 22 63 295 - -
Pral3869g00003 668 SMART AAA_5 84 278 IPR003593 GO:0016887
Pral3869g00003 668 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 301 IPR003439 GO:0005524
Pral3869g00003 668 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3869g00003 Pral-Chr3869 24358 32589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3869g00003 74 315 Calmodulin-binding Proteins AT2G36910 26.829 9.59e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3869g00003 K05681 - qsa:O6P43_004081 874.774