Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3867g00019 ATGTGCGCTGACACATTGGTAGGAGATGAAATGCTGAAGGGCATTTCAGGAGGGCAAAAGAAGCGTCTTACAACAGGTGAATTACTGGTTGGGCCAGCAAGAGTCTTGTTCATGGATGAAATATCAACTGGCCTTGATAGTTCAACTACTTACCAAATTGTCAAATATCTTAAGCATTCCACCCGTGCGCTTGATACAACCACTATCATATCTCTTCTACAACCAGCTCCCGAGACATATGAGTTGTTTGATGATGTCATTCTTTTGTGCGAGGGTCAGATTGTGTATCAGGGACCTCGTGAGTCTACTCTTGAATTTTTCAGATTGATGGGATTTAGTTGTCCTGAGCGAAAGAATGTGGCAGACTTCTTGCAAGAAGTTACATCGAAGAAGGACCAAGAACAGTACTGGTCTGTTCTCGACCGTCCTTACCGGTACATACCCGTTGGGCAGTTTGCAGAAGCTTTTGCTTTATATCGCGATGGCAAGAATTTGTCAGAGGAACTAAAAGTTCCTTTCAATAAACGCTTTAATCACCCAGCAGCCTTGGCAACAACTAACTACGGAGCGAAAGGGCTTGAATTGCTCAAAACCAGCTACCAATGGCAGAGGCTACTAATGAAGCGAAATTCATTTATTTATGTCTTTAAATTTGTTCAGCTTCTTTTGGTTGCTTTGATCACAATGAGTGTTTTCTTCCGGACAACAATGCATAAAGACACAATAGACGATGGAGGCATATATCTGGGGGCGCTGTACTTTTCTATGGTAATTATTCTGTTCAATGGTTTTACGGAGGTATCAATGTTGGTTGCAAAGCTTCCAGTACTTTACAAGCACAGAGACTTGCACTTCTATCCTAGTTGGGTTTATACACTCCCTTCTTGGCTCCTTAGTGTTCCAACTTCCCTCATGGAGGCCGGATGCTGGGTTGTAGTCTCGTACTACACGATTGGATATGATCCTGCTATTTCTAGATTTTTAAAGCAGTTTTTGCTATATTTCCTTCTACACCAAATGTCAATTGGTCTCTTCCGTTTGATAGGATCGTTGGGCAGGAATATGATCGTAGCCAATACCTTCGGATCCTTTGCCATGTTGATTGTGATGGCCCTTGGAGGATACATAATTTCAAGAGACCGTATACCTCGTTGGTGGATATGGGGCTTTTGGATTTCTCCGCTAATGTATGGACAAAATTCGGCTTCTGCAAATGAGTTCCTTGGACATTCATGGCATAAGCCTGCTGGAAATGATACTTCACTTCCGTTGGGTAAAGCATTATTAAGAGAGCGGAGTTTGTATCCAGAGAGCTATTGGTATTGGATTGGTGTTGGTGCAATGGTTGGATATACGATTTTGTTCAATACATTATTTACTATCTTCCTAGCTTACCTTAATCCTTGGGGCAGGCCACAAGCTGTTGTCTCAAAGGAGGAGCTAGAAGAAAGAGAAAGGAGGAGAAGAGGCGAAAGTTCTGTTATTGAGCTGAGGGAGTACTTCCGGCATTCATCATCAAATGGAAAGCATTTTAAGCAACGAGGGATGGTTCTTCCTTTTCAACCGCTTTCAATGGCTTTCAGCAATATCAATTACTATGTGGATGTCCCCATGGAATTGAAACAACAAGGGATATCAGAAGACAGGTTGCAGCTGTTAGTTAATGTTACAGGAGCTTTTAGGCCTGGGGTGCTCACAGCATTGGTTGGAGTCAGTGGTGCTGGAAAAACCACTCTTATGGATGTATTGGCTGGAAGAAAAACTGGTGGAACCATAGAAGGGAGCATATGCATTTCTGGTTATCCAAAAAGACAAGAAACTTTTGCAAGAATTTCTGGATATTGTGAGCAGACTGATGTTCATTCTCCTTGCTTGACTGTCTGGGAATCACTACTATTCTCTGCTTGGCTTCGATTACCTTCAGATGTTAGCTTGGAGATACAAAAGGCTTTTGTTGAGGAGGTAATGGAGCTTGTGGAGCTCACTTCATTGAGTGGAGCACTTGTGGGTTTACCTGGAATTGATGGATTGTCAACAGAACAACGAAAAAGGTTAACTATAGCAATTGAACTGGTTGCCAACCCTTCTATAGTCTTTATGGATGAGCCCACATCAGGGTTGGACGCTCGGGCAGCTGCCATTGTGATGCGAACAGTGAGGAATATAGTAAATACTGGGAGAACTATTGTGTGCACAATCCATCAGCCTAGCATAGAAATATTTGAATCCTTTGATGAGCTTCTGTGTATGAAGCGGGGGGGTGAGCTAATATATGCTGGTCCGCTCGGCCCCAAGTCTTGTGAGCTAATAAGTTATTTTGAGTCGATTGAAGGTGTTCCAAAGATTAGAACAGGATATAACCCTTCTACATGGATGCTGGAGGTTACTTCTCCTTTGGAAGAAAGTCGTCTAGGAGTGGATTTTGCTGAAATCTACAGAAGATCAAGCTTATTTCTGCGAAACAAAGACTTGGTTGAAACCTTGAGCAAGCCCAGTAGTAATTCAAAAGAATTGAGTTTTCCTAGCAAGTATTGTCGGTCATATTTTGAGCAGTTCCTAACTTGCCTCTGGAAGCAAAATCTATCTTATTGGCGTAACCCACAATACACTGCTGTTCGCTTCTTCTACACTGTCATTATCTCATTGATGTTGGGAACTATATGCTGGAGATTTGGTGCCAAAAGGGAATCGCAGCAAGATATATTTAATGCCATGGGATCTATGTACGCAGCAATTCTATTTATTGGCATCACAAACGGCACGGCTGTTCAACCTGTTCTTTCTGTTGAAAGATTTGTTTCATATCGAGAAAGAGCAGCAGGGATGTATTCAGCCTTACCATTTGCATTTGCCCAGGGTGCTATTGAGTTTCCTTACGTATTTGCCCAATCTCTTATATACTGTTCAATATTCTATTCCATGGCTTGCTTTGAGTGGAGTGCTGTTAAGTTCATTTGGTACATATTCTTCATGTACTTTACCATGCTGTATTTTACCTTCTATGGAATGATGACCACGGCCGTCACACCAAATCATCATGTTGCTGCCATTATTGCTGCTCCATTTTATATGCTGTGGAATCTCTTCAGCGGTTTCATGATCCCTCATAAGAGAATTCCAATATGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCCTGGACTCTCTATGGCCTGGTAACTTCTCAGTATGGTGATGATTATAAACTTGTGAAGCTATCTGATGGAATAAGCTTGAGACCCATAAAGCAGGTTCTGGTTGAAGTGTTTGGTTATAAGCATGATTTCTTGTGCATTGCTGCCATAATGGTGCCTGGTTTCTGCATATTTTTTGCAATAATATTTGCCTTTGCAATTAAATCCTTCAATTTCCAAAGGAGATGA 3384 0.419 MCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISTGLDSSTTYQIVKYLKHSTRALDTTTIISLLQPAPETYELFDDVILLCEGQIVYQGPRESTLEFFRLMGFSCPERKNVADFLQEVTSKKDQEQYWSVLDRPYRYIPVGQFAEAFALYRDGKNLSEELKVPFNKRFNHPAALATTNYGAKGLELLKTSYQWQRLLMKRNSFIYVFKFVQLLLVALITMSVFFRTTMHKDTIDDGGIYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTLPSWLLSVPTSLMEAGCWVVVSYYTIGYDPAISRFLKQFLLYFLLHQMSIGLFRLIGSLGRNMIVANTFGSFAMLIVMALGGYIISRDRIPRWWIWGFWISPLMYGQNSASANEFLGHSWHKPAGNDTSLPLGKALLRERSLYPESYWYWIGVGAMVGYTILFNTLFTIFLAYLNPWGRPQAVVSKEELEERERRRRGESSVIELREYFRHSSSNGKHFKQRGMVLPFQPLSMAFSNINYYVDVPMELKQQGISEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGTIEGSICISGYPKRQETFARISGYCEQTDVHSPCLTVWESLLFSAWLRLPSDVSLEIQKAFVEEVMELVELTSLSGALVGLPGIDGLSTEQRKRLTIAIELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIEIFESFDELLCMKRGGELIYAGPLGPKSCELISYFESIEGVPKIRTGYNPSTWMLEVTSPLEESRLGVDFAEIYRRSSLFLRNKDLVETLSKPSSNSKELSFPSKYCRSYFEQFLTCLWKQNLSYWRNPQYTAVRFFYTVIISLMLGTICWRFGAKRESQQDIFNAMGSMYAAILFIGITNGTAVQPVLSVERFVSYRERAAGMYSALPFAFAQGAIEFPYVFAQSLIYCSIFYSMACFEWSAVKFIWYIFFMYFTMLYFTFYGMMTTAVTPNHHVAAIIAAPFYMLWNLFSGFMIPHKRIPIWWRWYYWANPVAWTLYGLVTSQYGDDYKLVKLSDGISLRPIKQVLVEVFGYKHDFLCIAAIMVPGFCIFFAIIFAFAIKSFNFQRR 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3867g00019 1127 Pfam ABC transporter 554 705 IPR003439 GO:0005524
Pral3867g00019 1127 SMART AAA_5 562 754 IPR003593 GO:0016887
Pral3867g00019 1127 FunFam ABC transporter G family member 34 539 771 - -
Pral3867g00019 1127 Pfam ABC-2 type transporter 74 127 IPR043926 GO:0140359
Pral3867g00019 1127 CDD ABCG_PDR_domain2 522 760 IPR034003 -
Pral3867g00019 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 130 IPR027417 -
Pral3867g00019 1127 Gene3D - 538 764 IPR027417 -
Pral3867g00019 1127 Pfam Plant PDR ABC transporter associated 412 476 IPR013581 -
Pral3867g00019 1127 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 525 778 IPR003439 GO:0005524
Pral3867g00019 1127 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 1 1127 - -
Pral3867g00019 1127 Gene3D - 3 141 IPR027417 -
Pral3867g00019 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 761 IPR027417 -
Pral3867g00019 1127 Pfam ABC-2 type transporter 196 407 IPR013525 GO:0016020|GO:0140359
Pral3867g00019 1127 Pfam ABC-2 type transporter 850 1063 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3867g00019 Pral-Chr3867 145910 153902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3867g00019 546 737 Calmodulin-binding Proteins AT2G36910 26.020 1.05e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3867g00019 K08711 - gmx:100815410 1961.42