Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3867g00018 ATGACCGAGGCTCTTTTAAGACAATTGCGACTATACAAGAGAAAGCGAAGTAAATTGACAATTCTAGCCGACATTAGTGGGATTATCAGACCCTCAAGATTGACTCTGCTGTTGGGCCCGCCAAGCTCTGGAAAAACGACACTACTTTTAGCTCTTGCTGGCAGGCTGGGGCCTGGTTTGCAGATGTCAGGGAGCATTACATACAATGGGCATACTCTCAATGAGTTTGTTCCTCAGAAAACAGCTGCTTATGTCAGCCAACAAGATTCACACGTGCCAGAGATGACTGTAAGGGAAACTCTTGATTTTGCTGGCCGCTGTCAAGGCGTTGGATTTAAGCATGATATGGTGCTGGAACTCGCCAGAAGAGAAAAGAATTCTGGGATAAAACCTGATGAAGATCTTGATATATTTATGAAGGCTTTAGCACTTGGTGAAAAGGAAACAAATCTTGTTGTGGAATACGTCATGAAGATATTAGGTTTGGACATGTGCGCTGACACATTGGTAGGAGATGAAATGCTGAAGGGCATTTCAGGAGGGCAAAAGAAGCGTCTTACAACAGGTGAATTACTGGTTGGGCCAGCAAGAGTCTTGTTCATGGATGAAATATCAACTGGCCTTGATAGTTCAACTACTTACCAAATTGTCAAATATCTTAAGCATTCCACCCGTGCGCTTGATACAACCACTATCATATCTCTTCTACAACCAGCTCCCGAGACATATGAGTTGTTTGATGATGTCATTCTTTTGTGCGAGGGTCAGATTGTGTATCAGGGACCTCGTGAGTCTACTCTTGAATTTTTCAGATTGATGGGATTTAGTTGTCCTGAGCGAAAGAATGTGGCAGACTTCTTGCAAGAAGTTACATCGAAGAAGGACCAAGAACAGTACTGGTCTGTTCTCGACCGTCCTTACCGGTACATACCCGTTGGGCAGTTTGCAGAAGCTTTTGCTTTATATCGCGATGGCAAGAATTTGTCAGAGGAACTAAAAGTTCCTTTCAATAAACGCTTTAATCACCCAGCAGCCTTGGCAACAACTAACTACGGAGCGAAAGGGCTTGAATTGCTCAAAACCAGCTACCAATGGCAGAGGCTACTAATGAAGCGAAATTCATTTATTTATGTCTTTAAATTTGTTCAGCTTCTTTTGGTTGCTTTGATCACAATGAGTGTTTTCTTCCGGACAACAATGCATAAAGACACAATAGACGATGGAGGCATATATCTGGGGGCGCTGTACTTTTCTATGGTAATTATTCTGTTCAATGGTTTTACGGAGGTATCAATGTTGGTTGCAAAGCTTCCAGTACTTTACAAGCACAGAGACTTGCACTTCTATCCTAGTTGGGTTTATACACTCCCTTCTTGGCTCCTTAGTGTTCCAACTTCCCTCATGGAGGCCGGATGCTGGGTTGTAGTCTCGTACTACACGATTGGATATGATCCTGCTATTTCTAGATTTTTAAAGCAGTTTTTGCTATATTTCCTTCTACACCAAATGTCAATTGGTCTCTTCCGTTTGATAGGATCGTTGGGCAGGAATATGATCGTAGCCAATACCTTCGGATCCTTTGCCATGTTGATTGTGATGGCCCTTGGAGGATACATAATTTCAAGAGACCGTATACCTCGTTGGTGGATATGGGGCTTTTGGATTTCTCCGCTAATGTATGGACAAAATTCGGCTTCTGCAAATGAGTTCCTTGGACATTCATGGCATAAGCCTGCTGGAAATGATACTTCACTTCCGTTGGGTAAAGCATTATTAAGAGAGCGGAGTTTGTATCCAGAGAGCTATTGGTATTGGATTGGTGTTGGTGCAATGGTTGGATATACGATTTTGTTCAATACATTATTTACTATCTTCCTAGCTTACCTTAATCCTTGGGGCAGGCCACAAGCTGTTGTCTCAAAGGAGGAGCTAGAAGAAAGAGAAAGGAGGAGAAGAGGCGAAAGTTCTGTTATTGAGCTGAGGGAGTACTTCCGGCATTCATCATCAAATGGAAAGCATTTTAAGCAACGAGGGATGGTTCTTCCTTTTCAACCGCTTTCAATGGCTTTCAGCAATATCAATTACTATGTGGATGTCCCCATGGAATTGAAACAACAAGGGATATCAGAAGACAGGTTGCAGCTGTTAGTTAATGTTACAGGAGCTTTTAGGCCTGGGGTGCTCACAGCATTGGTTGGAGTCAGTGGTGCTGGAAAAACCACTCTTATGGATGTATTGGCTGGAAGAAAAACTGGTGGAACCATAGAAGGGAGCATATGCATTTCTGGTTATCCAAAAAGACAAGAAACTTTTGCAAGAATTTCTGGATATTGTGAGCAGACTGATGTTCATTCTCCTTGCTTGACTGTCTGGGAATCACTACTATTCTCTGCTTGGCTTCGATTACCTTCAGATGTTAGCTTGGAGATACAAAAGGCTTTTGTTGAGGAGGTAATGGAGCTTGTGGAGCTCACTTCATTGAGTGGAGCACTTGTGGGTTTACCTGGAATTGATGGATTGTCAACAGAACAACGAAAAAGGTTAACTATAGCAATTGAACTGGTTGCCAACCCTTCTATAGTCTTTATGGATGAGCCCACATCAGGGTTGGACGCTCGGGCAGCTGCCATTGTGATGCGAACAGTGAGGAATATAGTAAATACTGGGAGAACTATTGTGTGCACAATCCATCAGCCTAGCATAGAAATATTTGAATCCTTTGATGAGCTTCTGTGTATGAAGCGGGGGGGTGAGCTAATATATGCTGGTCCGCTCGGCCCCAAGTCTTGTGAGCTAATAAGTTATTTTGAGTCGATTGAAGGTGTTCCAAAGATTAGAACAGGATATAACCCTTCTACATGGATGCTGGAGGTTACTTCTCCTTTGGAAGAAAGTCGTCTAGGAGTGGATTTTGCTGAAATCTACAGAAGATCAAGCTTATTTCTGCGAAACAAAGACTTGGTTGAAACCTTGAGCAAGCCCAGTAGTAATTCAAAAGAATTGAGTTTTCCTAGCAAGTATTGTCGGTCATATTTTGAGCAGTTCCTAACTTGCCTCTGGAAGCAAAATCTATCTTATTGGCGTAACCCACAATACACTGCTGTTCGCTTCTTCTACACTGTCATTATCTCATTGATGTTGGGAACTATATGCTGGAGATTTGGTGCCAAAAGGGAATCGCAGCAAGATATATTTAATGCCATGGGATCTATGTACGCAGCAATTCTATTTATTGGCATCACAAACGGCACGGCTGTTCAACCTGTTCTTTCTGTTGAAAGATTTGTTTCATATCGAGAAAGAGCAGCAGGGATGTATTCAGCCTTACCATTTGCATTTGCCCAGGGTGCTATTGAGTTTCCTTACGTATTTGCCCAATCTCTTATATACTGTTCAATATTCTATTCCATGGCTTGCTTTGAGTGGAGTGCTGTTAAGTTCATTTGGTACATATTCTTCATGTACTTTACCATGCTGTATTTTACCTTCTATGGAATGATGACCACGGCCGTCACACCAAATCATCATGTTGCTGCCATTATTGCTGCTCCATTTTATATGCTGTGGAATCTCTTCAGCGGTTTCATGATCCCTCATAAGAGAATTCCAATATGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCCTGGACTCTCTATGGCCTGGTAACTTCTCAGTATGGTGATGATTATAAACTTGTGAAGCTATCTGATGGAATAAGCTTGAGACCCATAAAGCAGGTTCTGGTTGAAGTGTTTGGTTATAAGCATGATTTCTTGTGCATTGCTGCCATAATGGTGCCTGGTTTCTGCATATTTTTTGCAATAATATTTGCCTTTGCAATTAAATCCTTCAATTTCCAAAGGAGATGA 3873 0.4211 MTEALLRQLRLYKRKRSKLTILADISGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGSITYNGHTLNEFVPQKTAAYVSQQDSHVPEMTVRETLDFAGRCQGVGFKHDMVLELARREKNSGIKPDEDLDIFMKALALGEKETNLVVEYVMKILGLDMCADTLVGDEMLKGISGGQKKRLTTGELLVGPARVLFMDEISTGLDSSTTYQIVKYLKHSTRALDTTTIISLLQPAPETYELFDDVILLCEGQIVYQGPRESTLEFFRLMGFSCPERKNVADFLQEVTSKKDQEQYWSVLDRPYRYIPVGQFAEAFALYRDGKNLSEELKVPFNKRFNHPAALATTNYGAKGLELLKTSYQWQRLLMKRNSFIYVFKFVQLLLVALITMSVFFRTTMHKDTIDDGGIYLGALYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWVYTLPSWLLSVPTSLMEAGCWVVVSYYTIGYDPAISRFLKQFLLYFLLHQMSIGLFRLIGSLGRNMIVANTFGSFAMLIVMALGGYIISRDRIPRWWIWGFWISPLMYGQNSASANEFLGHSWHKPAGNDTSLPLGKALLRERSLYPESYWYWIGVGAMVGYTILFNTLFTIFLAYLNPWGRPQAVVSKEELEERERRRRGESSVIELREYFRHSSSNGKHFKQRGMVLPFQPLSMAFSNINYYVDVPMELKQQGISEDRLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGTIEGSICISGYPKRQETFARISGYCEQTDVHSPCLTVWESLLFSAWLRLPSDVSLEIQKAFVEEVMELVELTSLSGALVGLPGIDGLSTEQRKRLTIAIELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIEIFESFDELLCMKRGGELIYAGPLGPKSCELISYFESIEGVPKIRTGYNPSTWMLEVTSPLEESRLGVDFAEIYRRSSLFLRNKDLVETLSKPSSNSKELSFPSKYCRSYFEQFLTCLWKQNLSYWRNPQYTAVRFFYTVIISLMLGTICWRFGAKRESQQDIFNAMGSMYAAILFIGITNGTAVQPVLSVERFVSYRERAAGMYSALPFAFAQGAIEFPYVFAQSLIYCSIFYSMACFEWSAVKFIWYIFFMYFTMLYFTFYGMMTTAVTPNHHVAAIIAAPFYMLWNLFSGFMIPHKRIPIWWRWYYWANPVAWTLYGLVTSQYGDDYKLVKLSDGISLRPIKQVLVEVFGYKHDFLCIAAIMVPGFCIFFAIIFAFAIKSFNFQRR 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3867g00018 1290 Gene3D - 7 304 IPR027417 -
Pral3867g00018 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 6 279 IPR003439 GO:0005524
Pral3867g00018 1290 FunFam ABC transporter G family member 34 9 313 - -
Pral3867g00018 1290 Pfam ABC transporter 23 204 IPR003439 GO:0005524
Pral3867g00018 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 688 941 IPR003439 GO:0005524
Pral3867g00018 1290 Pfam Plant PDR ABC transporter associated 575 639 IPR013581 -
Pral3867g00018 1290 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 2 1290 - -
Pral3867g00018 1290 Pfam ABC-2 type transporter 1013 1226 IPR013525 GO:0016020|GO:0140359
Pral3867g00018 1290 Pfam ABC-2 type transporter 359 570 IPR013525 GO:0016020|GO:0140359
Pral3867g00018 1290 Gene3D - 701 927 IPR027417 -
Pral3867g00018 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 706 924 IPR027417 -
Pral3867g00018 1290 Pfam ABC-2 type transporter 237 290 IPR043926 GO:0140359
Pral3867g00018 1290 Pfam ABC transporter 717 868 IPR003439 GO:0005524
Pral3867g00018 1290 CDD ABCG_PDR_domain2 685 923 IPR034003 -
Pral3867g00018 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 279 IPR027417 -
Pral3867g00018 1290 FunFam ABC transporter G family member 34 702 934 - -
Pral3867g00018 1290 SMART AAA_5 31 256 IPR003593 GO:0016887
Pral3867g00018 1290 SMART AAA_5 725 917 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3867g00018 Pral-Chr3867 143902 153933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3867g00018 709 900 Calmodulin-binding Proteins AT2G36910 26.020 1.54e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3867g00018 K08711 - gmx:100815410 2226.05